Gene : Brara.H03122 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR12802:SF43 - PROTEIN CCA1-RELATED Genomic Order:  3122
Name:  ? Brara.H03122 Secondary Identifier:  ? PAC:30647957
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H03122 0.5kb upstream 0.5kb upstream 4114 true A08: 23116360-23120473 Brassica rapa FPsc
Brara.H03122 0.5kb upstream 0.5kb upstream 500 false A08: 23119974-23120473 Brassica rapa FPsc
Brara.H03122 0.5kb downstream 0.5kb downstream 4114 true A08: 23115860-23119973 Brassica rapa FPsc
Brara.H03122 0.5kb downstream 0.5kb downstream 500 false A08: 23115860-23116359 Brassica rapa FPsc
Brara.H03122 1.0kb upstream 1.0kb upstream 4614 true A08: 23116360-23120973 Brassica rapa FPsc
Brara.H03122 1.0kb upstream 1.0kb upstream 1000 false A08: 23119974-23120973 Brassica rapa FPsc
Brara.H03122 1.0kb downstream 1.0kb downstream 4614 true A08: 23115360-23119973 Brassica rapa FPsc
Brara.H03122 1.0kb downstream 1.0kb downstream 1000 false A08: 23115360-23116359 Brassica rapa FPsc
Brara.H03122 2.0kb upstream 2.0kb upstream 5614 true A08: 23116360-23121973 Brassica rapa FPsc
Brara.H03122 2.0kb upstream 2.0kb upstream 2000 false A08: 23119974-23121973 Brassica rapa FPsc
Brara.H03122 2.0kb downstream 2.0kb downstream 5614 true A08: 23114360-23119973 Brassica rapa FPsc
Brara.H03122 2.0kb downstream 2.0kb downstream 2000 false A08: 23114360-23116359 Brassica rapa FPsc
Brara.H03122 5.0kb upstream 5.0kb upstream 8614 true A08: 23116360-23124973 Brassica rapa FPsc
Brara.H03122 5.0kb upstream 5.0kb upstream 5000 false A08: 23119974-23124973 Brassica rapa FPsc
Brara.H03122 5.0kb downstream 5.0kb downstream 8614 true A08: 23111360-23119973 Brassica rapa FPsc
Brara.H03122 5.0kb downstream 5.0kb downstream 5000 false A08: 23111360-23116359 Brassica rapa FPsc
Brara.H03122 10.0kb upstream 10.0kb upstream 13614 true A08: 23116360-23129973 Brassica rapa FPsc
Brara.H03122 10.0kb upstream 10.0kb upstream 10000 false A08: 23119974-23129973 Brassica rapa FPsc
Brara.H03122 10.0kb downstream 10.0kb downstream 13614 true A08: 23106360-23119973 Brassica rapa FPsc
Brara.H03122 10.0kb downstream 10.0kb downstream 10000 false A08: 23106360-23116359 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355090 5261 Brassicaceae Singleton cluster - no MSA
123842452 5264 Brassicales-Malvales View MSA
124323506 5266 SBM View MSA
124169502 5268 Malvidae View MSA
124066959 5270 Rosid View MSA
123746755 5271 Pentapetalae View MSA
122793236 5272 Eudicot View MSA
122048982 5273 Angiosperm View MSA
121350117 5274 Embryophyte View MSA
123427162 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier