Gene : Brara.I01643 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.4.2.17 - ATP phosphoribosyltransferase / Phosphoribosyl-ATP pyrophosphorylase Genomic Order:  1643
Name:  ? Brara.I01643 Secondary Identifier:  ? PAC:30644132
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HISTSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01643 0.5kb upstream 0.5kb upstream 3366 true A09: 11000227-11003592 Brassica rapa FPsc
Brara.I01643 0.5kb upstream 0.5kb upstream 500 false A09: 11003093-11003592 Brassica rapa FPsc
Brara.I01643 0.5kb downstream 0.5kb downstream 3366 true A09: 10999727-11003092 Brassica rapa FPsc
Brara.I01643 0.5kb downstream 0.5kb downstream 500 false A09: 10999727-11000226 Brassica rapa FPsc
Brara.I01643 1.0kb upstream 1.0kb upstream 3866 true A09: 11000227-11004092 Brassica rapa FPsc
Brara.I01643 1.0kb upstream 1.0kb upstream 1000 false A09: 11003093-11004092 Brassica rapa FPsc
Brara.I01643 1.0kb downstream 1.0kb downstream 3866 true A09: 10999227-11003092 Brassica rapa FPsc
Brara.I01643 1.0kb downstream 1.0kb downstream 1000 false A09: 10999227-11000226 Brassica rapa FPsc
Brara.I01643 2.0kb upstream 2.0kb upstream 4866 true A09: 11000227-11005092 Brassica rapa FPsc
Brara.I01643 2.0kb upstream 2.0kb upstream 2000 false A09: 11003093-11005092 Brassica rapa FPsc
Brara.I01643 2.0kb downstream 2.0kb downstream 4866 true A09: 10998227-11003092 Brassica rapa FPsc
Brara.I01643 2.0kb downstream 2.0kb downstream 2000 false A09: 10998227-11000226 Brassica rapa FPsc
Brara.I01643 5.0kb upstream 5.0kb upstream 7866 true A09: 11000227-11008092 Brassica rapa FPsc
Brara.I01643 5.0kb upstream 5.0kb upstream 5000 false A09: 11003093-11008092 Brassica rapa FPsc
Brara.I01643 5.0kb downstream 5.0kb downstream 7866 true A09: 10995227-11003092 Brassica rapa FPsc
Brara.I01643 5.0kb downstream 5.0kb downstream 5000 false A09: 10995227-11000226 Brassica rapa FPsc
Brara.I01643 10.0kb upstream 10.0kb upstream 12866 true A09: 11000227-11013092 Brassica rapa FPsc
Brara.I01643 10.0kb upstream 10.0kb upstream 10000 false A09: 11003093-11013092 Brassica rapa FPsc
Brara.I01643 10.0kb downstream 10.0kb downstream 12866 true A09: 10990227-11003092 Brassica rapa FPsc
Brara.I01643 10.0kb downstream 10.0kb downstream 10000 false A09: 10990227-11000226 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354073 5261 Brassicaceae Singleton cluster - no MSA
123840456 5264 Brassicales-Malvales View MSA
124322722 5266 SBM View MSA
124239271 5268 Malvidae View MSA
124065135 5270 Rosid View MSA
123747829 5271 Pentapetalae View MSA
122790103 5272 Eudicot View MSA
122042069 5273 Angiosperm View MSA
121345675 5274 Embryophyte View MSA
123427111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier