Gene : Brara.I01668 B. rapa FPsc v1.3
Defline:  (1 of 12) 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  1668
Name:  ? Brara.I01668 Secondary Identifier:  ? PAC:30645919
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2541 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5670 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01668 0.5kb upstream 0.5kb upstream 3256 true A09: 11350934-11354189 Brassica rapa FPsc
Brara.I01668 0.5kb upstream 0.5kb upstream 500 false A09: 11353690-11354189 Brassica rapa FPsc
Brara.I01668 0.5kb downstream 0.5kb downstream 3256 true A09: 11350434-11353689 Brassica rapa FPsc
Brara.I01668 0.5kb downstream 0.5kb downstream 500 false A09: 11350434-11350933 Brassica rapa FPsc
Brara.I01668 1.0kb upstream 1.0kb upstream 3756 true A09: 11350934-11354689 Brassica rapa FPsc
Brara.I01668 1.0kb upstream 1.0kb upstream 1000 false A09: 11353690-11354689 Brassica rapa FPsc
Brara.I01668 1.0kb downstream 1.0kb downstream 3756 true A09: 11349934-11353689 Brassica rapa FPsc
Brara.I01668 1.0kb downstream 1.0kb downstream 1000 false A09: 11349934-11350933 Brassica rapa FPsc
Brara.I01668 2.0kb upstream 2.0kb upstream 4756 true A09: 11350934-11355689 Brassica rapa FPsc
Brara.I01668 2.0kb upstream 2.0kb upstream 2000 false A09: 11353690-11355689 Brassica rapa FPsc
Brara.I01668 2.0kb downstream 2.0kb downstream 4756 true A09: 11348934-11353689 Brassica rapa FPsc
Brara.I01668 2.0kb downstream 2.0kb downstream 2000 false A09: 11348934-11350933 Brassica rapa FPsc
Brara.I01668 5.0kb upstream 5.0kb upstream 7756 true A09: 11350934-11358689 Brassica rapa FPsc
Brara.I01668 5.0kb upstream 5.0kb upstream 5000 false A09: 11353690-11358689 Brassica rapa FPsc
Brara.I01668 5.0kb downstream 5.0kb downstream 7756 true A09: 11345934-11353689 Brassica rapa FPsc
Brara.I01668 5.0kb downstream 5.0kb downstream 5000 false A09: 11345934-11350933 Brassica rapa FPsc
Brara.I01668 10.0kb upstream 10.0kb upstream 12756 true A09: 11350934-11363689 Brassica rapa FPsc
Brara.I01668 10.0kb upstream 10.0kb upstream 10000 false A09: 11353690-11363689 Brassica rapa FPsc
Brara.I01668 10.0kb downstream 10.0kb downstream 12756 true A09: 11340934-11353689 Brassica rapa FPsc
Brara.I01668 10.0kb downstream 10.0kb downstream 10000 false A09: 11340934-11350933 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371858 5261 Brassicaceae View MSA
123838211 5264 Brassicales-Malvales View MSA
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier