Gene : Brara.B02765 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Genomic Order:  2765
Name:  ? Brara.B02765 Secondary Identifier:  ? PAC:30609011
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWYDQC-4 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02765 0.5kb upstream 0.5kb upstream 2327 true A02: 21403739-21406065 Brassica rapa FPsc
Brara.B02765 0.5kb upstream 0.5kb upstream 500 false A02: 21405566-21406065 Brassica rapa FPsc
Brara.B02765 0.5kb downstream 0.5kb downstream 2327 true A02: 21403239-21405565 Brassica rapa FPsc
Brara.B02765 0.5kb downstream 0.5kb downstream 500 false A02: 21403239-21403738 Brassica rapa FPsc
Brara.B02765 1.0kb upstream 1.0kb upstream 2827 true A02: 21403739-21406565 Brassica rapa FPsc
Brara.B02765 1.0kb upstream 1.0kb upstream 1000 false A02: 21405566-21406565 Brassica rapa FPsc
Brara.B02765 1.0kb downstream 1.0kb downstream 2827 true A02: 21402739-21405565 Brassica rapa FPsc
Brara.B02765 1.0kb downstream 1.0kb downstream 1000 false A02: 21402739-21403738 Brassica rapa FPsc
Brara.B02765 2.0kb upstream 2.0kb upstream 3827 true A02: 21403739-21407565 Brassica rapa FPsc
Brara.B02765 2.0kb upstream 2.0kb upstream 2000 false A02: 21405566-21407565 Brassica rapa FPsc
Brara.B02765 2.0kb downstream 2.0kb downstream 3827 true A02: 21401739-21405565 Brassica rapa FPsc
Brara.B02765 2.0kb downstream 2.0kb downstream 2000 false A02: 21401739-21403738 Brassica rapa FPsc
Brara.B02765 5.0kb upstream 5.0kb upstream 6827 true A02: 21403739-21410565 Brassica rapa FPsc
Brara.B02765 5.0kb upstream 5.0kb upstream 5000 false A02: 21405566-21410565 Brassica rapa FPsc
Brara.B02765 5.0kb downstream 5.0kb downstream 6827 true A02: 21398739-21405565 Brassica rapa FPsc
Brara.B02765 5.0kb downstream 5.0kb downstream 5000 false A02: 21398739-21403738 Brassica rapa FPsc
Brara.B02765 10.0kb upstream 10.0kb upstream 11827 true A02: 21403739-21415565 Brassica rapa FPsc
Brara.B02765 10.0kb upstream 10.0kb upstream 10000 false A02: 21405566-21415565 Brassica rapa FPsc
Brara.B02765 10.0kb downstream 10.0kb downstream 11827 true A02: 21393739-21405565 Brassica rapa FPsc
Brara.B02765 10.0kb downstream 10.0kb downstream 10000 false A02: 21393739-21403738 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365671 5261 Brassicaceae View MSA
123799011 5264 Brassicales-Malvales View MSA
124296578 5266 SBM View MSA
124244542 5268 Malvidae View MSA
124062448 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier