Gene : Brara.I01073 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.7.7.3 - Pantetheine-phosphate adenylyltransferase / PPAT Genomic Order:  1073
Name:  ? Brara.I01073 Secondary Identifier:  ? PAC:30641287
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc COA-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01073 0.5kb upstream 0.5kb upstream 1312 true A09: 6165306-6166617 Brassica rapa FPsc
Brara.I01073 0.5kb upstream 0.5kb upstream 500 false A09: 6165306-6165805 Brassica rapa FPsc
Brara.I01073 0.5kb downstream 0.5kb downstream 1312 true A09: 6165806-6167117 Brassica rapa FPsc
Brara.I01073 0.5kb downstream 0.5kb downstream 500 false A09: 6166618-6167117 Brassica rapa FPsc
Brara.I01073 1.0kb upstream 1.0kb upstream 1812 true A09: 6164806-6166617 Brassica rapa FPsc
Brara.I01073 1.0kb upstream 1.0kb upstream 1000 false A09: 6164806-6165805 Brassica rapa FPsc
Brara.I01073 1.0kb downstream 1.0kb downstream 1812 true A09: 6165806-6167617 Brassica rapa FPsc
Brara.I01073 1.0kb downstream 1.0kb downstream 1000 false A09: 6166618-6167617 Brassica rapa FPsc
Brara.I01073 2.0kb upstream 2.0kb upstream 2812 true A09: 6163806-6166617 Brassica rapa FPsc
Brara.I01073 2.0kb upstream 2.0kb upstream 2000 false A09: 6163806-6165805 Brassica rapa FPsc
Brara.I01073 2.0kb downstream 2.0kb downstream 2812 true A09: 6165806-6168617 Brassica rapa FPsc
Brara.I01073 2.0kb downstream 2.0kb downstream 2000 false A09: 6166618-6168617 Brassica rapa FPsc
Brara.I01073 5.0kb upstream 5.0kb upstream 5812 true A09: 6160806-6166617 Brassica rapa FPsc
Brara.I01073 5.0kb upstream 5.0kb upstream 5000 false A09: 6160806-6165805 Brassica rapa FPsc
Brara.I01073 5.0kb downstream 5.0kb downstream 5812 true A09: 6165806-6171617 Brassica rapa FPsc
Brara.I01073 5.0kb downstream 5.0kb downstream 5000 false A09: 6166618-6171617 Brassica rapa FPsc
Brara.I01073 10.0kb upstream 10.0kb upstream 10812 true A09: 6155806-6166617 Brassica rapa FPsc
Brara.I01073 10.0kb upstream 10.0kb upstream 10000 false A09: 6155806-6165805 Brassica rapa FPsc
Brara.I01073 10.0kb downstream 10.0kb downstream 10812 true A09: 6165806-6176617 Brassica rapa FPsc
Brara.I01073 10.0kb downstream 10.0kb downstream 10000 false A09: 6166618-6176617 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353389 5261 Brassicaceae Singleton cluster - no MSA
123791982 5264 Brassicales-Malvales Singleton cluster - no MSA
124289877 5266 SBM Singleton cluster - no MSA
124143128 5268 Malvidae Singleton cluster - no MSA
124041747 5270 Rosid View MSA
123751907 5271 Pentapetalae View MSA
122795383 5272 Eudicot View MSA
122050871 5273 Angiosperm View MSA
121345308 5274 Embryophyte View MSA
123425957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier