Gene : Brara.E00854 B. rapa FPsc v1.3
Defline:  (1 of 2) 5.3.1.16 - 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase / Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Genomic Order:  854
Name:  ? Brara.E00854 Secondary Identifier:  ? PAC:30623542
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc HISTSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E00854 0.5kb upstream 0.5kb upstream 2238 true A05: 4954237-4956474 Brassica rapa FPsc
Brara.E00854 0.5kb upstream 0.5kb upstream 500 false A05: 4954237-4954736 Brassica rapa FPsc
Brara.E00854 0.5kb downstream 0.5kb downstream 2238 true A05: 4954737-4956974 Brassica rapa FPsc
Brara.E00854 0.5kb downstream 0.5kb downstream 500 false A05: 4956475-4956974 Brassica rapa FPsc
Brara.E00854 1.0kb upstream 1.0kb upstream 2738 true A05: 4953737-4956474 Brassica rapa FPsc
Brara.E00854 1.0kb upstream 1.0kb upstream 1000 false A05: 4953737-4954736 Brassica rapa FPsc
Brara.E00854 1.0kb downstream 1.0kb downstream 2738 true A05: 4954737-4957474 Brassica rapa FPsc
Brara.E00854 1.0kb downstream 1.0kb downstream 1000 false A05: 4956475-4957474 Brassica rapa FPsc
Brara.E00854 2.0kb upstream 2.0kb upstream 3738 true A05: 4952737-4956474 Brassica rapa FPsc
Brara.E00854 2.0kb upstream 2.0kb upstream 2000 false A05: 4952737-4954736 Brassica rapa FPsc
Brara.E00854 2.0kb downstream 2.0kb downstream 3738 true A05: 4954737-4958474 Brassica rapa FPsc
Brara.E00854 2.0kb downstream 2.0kb downstream 2000 false A05: 4956475-4958474 Brassica rapa FPsc
Brara.E00854 5.0kb upstream 5.0kb upstream 6738 true A05: 4949737-4956474 Brassica rapa FPsc
Brara.E00854 5.0kb upstream 5.0kb upstream 5000 false A05: 4949737-4954736 Brassica rapa FPsc
Brara.E00854 5.0kb downstream 5.0kb downstream 6738 true A05: 4954737-4961474 Brassica rapa FPsc
Brara.E00854 5.0kb downstream 5.0kb downstream 5000 false A05: 4956475-4961474 Brassica rapa FPsc
Brara.E00854 10.0kb upstream 10.0kb upstream 11738 true A05: 4944737-4956474 Brassica rapa FPsc
Brara.E00854 10.0kb upstream 10.0kb upstream 10000 false A05: 4944737-4954736 Brassica rapa FPsc
Brara.E00854 10.0kb downstream 10.0kb downstream 11738 true A05: 4954737-4966474 Brassica rapa FPsc
Brara.E00854 10.0kb downstream 10.0kb downstream 10000 false A05: 4956475-4966474 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041281 5273 Angiosperm View MSA
122376497 5261 Brassicaceae View MSA
123835580 5264 Brassicales-Malvales View MSA
124343226 5266 SBM View MSA
124249241 5268 Malvidae View MSA
124061773 5270 Rosid View MSA
123737700 5271 Pentapetalae View MSA
122790553 5272 Eudicot View MSA
121347171 5274 Embryophyte View MSA
123424389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier