Gene : Brara.I00943 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.6.1.45 - Serine--glyoxylate transaminase / SGAT Genomic Order:  943
Name:  ? Brara.I00943 Secondary Identifier:  ? PAC:30644291
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLYSYN-ALA-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I00943 0.5kb upstream 0.5kb upstream 2788 true A09: 5253288-5256075 Brassica rapa FPsc
Brara.I00943 0.5kb upstream 0.5kb upstream 500 false A09: 5253288-5253787 Brassica rapa FPsc
Brara.I00943 0.5kb downstream 0.5kb downstream 2788 true A09: 5253788-5256575 Brassica rapa FPsc
Brara.I00943 0.5kb downstream 0.5kb downstream 500 false A09: 5256076-5256575 Brassica rapa FPsc
Brara.I00943 1.0kb upstream 1.0kb upstream 3288 true A09: 5252788-5256075 Brassica rapa FPsc
Brara.I00943 1.0kb upstream 1.0kb upstream 1000 false A09: 5252788-5253787 Brassica rapa FPsc
Brara.I00943 1.0kb downstream 1.0kb downstream 3288 true A09: 5253788-5257075 Brassica rapa FPsc
Brara.I00943 1.0kb downstream 1.0kb downstream 1000 false A09: 5256076-5257075 Brassica rapa FPsc
Brara.I00943 2.0kb upstream 2.0kb upstream 4288 true A09: 5251788-5256075 Brassica rapa FPsc
Brara.I00943 2.0kb upstream 2.0kb upstream 2000 false A09: 5251788-5253787 Brassica rapa FPsc
Brara.I00943 2.0kb downstream 2.0kb downstream 4288 true A09: 5253788-5258075 Brassica rapa FPsc
Brara.I00943 2.0kb downstream 2.0kb downstream 2000 false A09: 5256076-5258075 Brassica rapa FPsc
Brara.I00943 5.0kb upstream 5.0kb upstream 7288 true A09: 5248788-5256075 Brassica rapa FPsc
Brara.I00943 5.0kb upstream 5.0kb upstream 5000 false A09: 5248788-5253787 Brassica rapa FPsc
Brara.I00943 5.0kb downstream 5.0kb downstream 7288 true A09: 5253788-5261075 Brassica rapa FPsc
Brara.I00943 5.0kb downstream 5.0kb downstream 5000 false A09: 5256076-5261075 Brassica rapa FPsc
Brara.I00943 10.0kb upstream 10.0kb upstream 12288 true A09: 5243788-5256075 Brassica rapa FPsc
Brara.I00943 10.0kb upstream 10.0kb upstream 10000 false A09: 5243788-5253787 Brassica rapa FPsc
Brara.I00943 10.0kb downstream 10.0kb downstream 12288 true A09: 5253788-5266075 Brassica rapa FPsc
Brara.I00943 10.0kb downstream 10.0kb downstream 10000 false A09: 5256076-5266075 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378838 5261 Brassicaceae View MSA
123836334 5264 Brassicales-Malvales View MSA
124344247 5266 SBM View MSA
124241250 5268 Malvidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier