Gene : Brara.B02378 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31989:SF48 - PROTEIN SOMBRERO Genomic Order:  2378
Name:  ? Brara.B02378 Secondary Identifier:  ? PAC:30610568
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02378 0.5kb upstream 0.5kb upstream 2313 true A02: 15608029-15610341 Brassica rapa FPsc
Brara.B02378 0.5kb upstream 0.5kb upstream 500 false A02: 15609842-15610341 Brassica rapa FPsc
Brara.B02378 0.5kb downstream 0.5kb downstream 2313 true A02: 15607529-15609841 Brassica rapa FPsc
Brara.B02378 0.5kb downstream 0.5kb downstream 500 false A02: 15607529-15608028 Brassica rapa FPsc
Brara.B02378 1.0kb upstream 1.0kb upstream 2813 true A02: 15608029-15610841 Brassica rapa FPsc
Brara.B02378 1.0kb upstream 1.0kb upstream 1000 false A02: 15609842-15610841 Brassica rapa FPsc
Brara.B02378 1.0kb downstream 1.0kb downstream 2813 true A02: 15607029-15609841 Brassica rapa FPsc
Brara.B02378 1.0kb downstream 1.0kb downstream 1000 false A02: 15607029-15608028 Brassica rapa FPsc
Brara.B02378 2.0kb upstream 2.0kb upstream 3813 true A02: 15608029-15611841 Brassica rapa FPsc
Brara.B02378 2.0kb upstream 2.0kb upstream 2000 false A02: 15609842-15611841 Brassica rapa FPsc
Brara.B02378 2.0kb downstream 2.0kb downstream 3813 true A02: 15606029-15609841 Brassica rapa FPsc
Brara.B02378 2.0kb downstream 2.0kb downstream 2000 false A02: 15606029-15608028 Brassica rapa FPsc
Brara.B02378 5.0kb upstream 5.0kb upstream 6813 true A02: 15608029-15614841 Brassica rapa FPsc
Brara.B02378 5.0kb upstream 5.0kb upstream 5000 false A02: 15609842-15614841 Brassica rapa FPsc
Brara.B02378 5.0kb downstream 5.0kb downstream 6813 true A02: 15603029-15609841 Brassica rapa FPsc
Brara.B02378 5.0kb downstream 5.0kb downstream 5000 false A02: 15603029-15608028 Brassica rapa FPsc
Brara.B02378 10.0kb upstream 10.0kb upstream 11813 true A02: 15608029-15619841 Brassica rapa FPsc
Brara.B02378 10.0kb upstream 10.0kb upstream 10000 false A02: 15609842-15619841 Brassica rapa FPsc
Brara.B02378 10.0kb downstream 10.0kb downstream 11813 true A02: 15598029-15609841 Brassica rapa FPsc
Brara.B02378 10.0kb downstream 10.0kb downstream 10000 false A02: 15598029-15608028 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345666 5261 Brassicaceae Singleton cluster - no MSA
123785478 5264 Brassicales-Malvales Singleton cluster - no MSA
124283617 5266 SBM Singleton cluster - no MSA
124251177 5268 Malvidae View MSA
124063722 5270 Rosid View MSA
123740377 5271 Pentapetalae View MSA
122788631 5272 Eudicot View MSA
122045964 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier