Gene : Brara.E01221 B. rapa FPsc v1.3
Defline:  (1 of 12) PF13041//PF13812 - PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1221
Name:  ? Brara.E01221 Secondary Identifier:  ? PAC:30627359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01221 0.5kb upstream 0.5kb upstream 4104 true A05: 7406171-7410274 Brassica rapa FPsc
Brara.E01221 0.5kb upstream 0.5kb upstream 500 false A05: 7406171-7406670 Brassica rapa FPsc
Brara.E01221 0.5kb downstream 0.5kb downstream 4104 true A05: 7406671-7410774 Brassica rapa FPsc
Brara.E01221 0.5kb downstream 0.5kb downstream 500 false A05: 7410275-7410774 Brassica rapa FPsc
Brara.E01221 1.0kb upstream 1.0kb upstream 4604 true A05: 7405671-7410274 Brassica rapa FPsc
Brara.E01221 1.0kb upstream 1.0kb upstream 1000 false A05: 7405671-7406670 Brassica rapa FPsc
Brara.E01221 1.0kb downstream 1.0kb downstream 4604 true A05: 7406671-7411274 Brassica rapa FPsc
Brara.E01221 1.0kb downstream 1.0kb downstream 1000 false A05: 7410275-7411274 Brassica rapa FPsc
Brara.E01221 2.0kb upstream 2.0kb upstream 5604 true A05: 7404671-7410274 Brassica rapa FPsc
Brara.E01221 2.0kb upstream 2.0kb upstream 2000 false A05: 7404671-7406670 Brassica rapa FPsc
Brara.E01221 2.0kb downstream 2.0kb downstream 5604 true A05: 7406671-7412274 Brassica rapa FPsc
Brara.E01221 2.0kb downstream 2.0kb downstream 2000 false A05: 7410275-7412274 Brassica rapa FPsc
Brara.E01221 5.0kb upstream 5.0kb upstream 8604 true A05: 7401671-7410274 Brassica rapa FPsc
Brara.E01221 5.0kb upstream 5.0kb upstream 5000 false A05: 7401671-7406670 Brassica rapa FPsc
Brara.E01221 5.0kb downstream 5.0kb downstream 8604 true A05: 7406671-7415274 Brassica rapa FPsc
Brara.E01221 5.0kb downstream 5.0kb downstream 5000 false A05: 7410275-7415274 Brassica rapa FPsc
Brara.E01221 10.0kb upstream 10.0kb upstream 13604 true A05: 7396671-7410274 Brassica rapa FPsc
Brara.E01221 10.0kb upstream 10.0kb upstream 10000 false A05: 7396671-7406670 Brassica rapa FPsc
Brara.E01221 10.0kb downstream 10.0kb downstream 13604 true A05: 7406671-7420274 Brassica rapa FPsc
Brara.E01221 10.0kb downstream 10.0kb downstream 10000 false A05: 7410275-7420274 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376162 5261 Brassicaceae View MSA
123838700 5264 Brassicales-Malvales View MSA
124345402 5266 SBM View MSA
124253596 5268 Malvidae View MSA
124061005 5270 Rosid View MSA
123740775 5271 Pentapetalae View MSA
122785854 5272 Eudicot View MSA
122042693 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121346514 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier