Gene : Brara.I02607 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR35695:SF1 - GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  2607
Name:  ? Brara.I02607 Secondary Identifier:  ? PAC:30641144
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-1319 Brassica rapa FPsc pathologic  
BrapaFPsc PWY4FS-7 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7411 Brassica rapa FPsc pathologic  
BrapaFPsc TRIGLSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02607 0.5kb upstream 0.5kb upstream 3535 true A09: 24609873-24613407 Brassica rapa FPsc
Brara.I02607 0.5kb upstream 0.5kb upstream 500 false A09: 24612908-24613407 Brassica rapa FPsc
Brara.I02607 0.5kb downstream 0.5kb downstream 3535 true A09: 24609373-24612907 Brassica rapa FPsc
Brara.I02607 0.5kb downstream 0.5kb downstream 500 false A09: 24609373-24609872 Brassica rapa FPsc
Brara.I02607 1.0kb upstream 1.0kb upstream 4035 true A09: 24609873-24613907 Brassica rapa FPsc
Brara.I02607 1.0kb upstream 1.0kb upstream 1000 false A09: 24612908-24613907 Brassica rapa FPsc
Brara.I02607 1.0kb downstream 1.0kb downstream 4035 true A09: 24608873-24612907 Brassica rapa FPsc
Brara.I02607 1.0kb downstream 1.0kb downstream 1000 false A09: 24608873-24609872 Brassica rapa FPsc
Brara.I02607 2.0kb upstream 2.0kb upstream 5035 true A09: 24609873-24614907 Brassica rapa FPsc
Brara.I02607 2.0kb upstream 2.0kb upstream 2000 false A09: 24612908-24614907 Brassica rapa FPsc
Brara.I02607 2.0kb downstream 2.0kb downstream 5035 true A09: 24607873-24612907 Brassica rapa FPsc
Brara.I02607 2.0kb downstream 2.0kb downstream 2000 false A09: 24607873-24609872 Brassica rapa FPsc
Brara.I02607 5.0kb upstream 5.0kb upstream 8035 true A09: 24609873-24617907 Brassica rapa FPsc
Brara.I02607 5.0kb upstream 5.0kb upstream 5000 false A09: 24612908-24617907 Brassica rapa FPsc
Brara.I02607 5.0kb downstream 5.0kb downstream 8035 true A09: 24604873-24612907 Brassica rapa FPsc
Brara.I02607 5.0kb downstream 5.0kb downstream 5000 false A09: 24604873-24609872 Brassica rapa FPsc
Brara.I02607 10.0kb upstream 10.0kb upstream 13035 true A09: 24609873-24622907 Brassica rapa FPsc
Brara.I02607 10.0kb upstream 10.0kb upstream 10000 false A09: 24612908-24622907 Brassica rapa FPsc
Brara.I02607 10.0kb downstream 10.0kb downstream 13035 true A09: 24599873-24612907 Brassica rapa FPsc
Brara.I02607 10.0kb downstream 10.0kb downstream 10000 false A09: 24599873-24609872 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353352 5261 Brassicaceae Singleton cluster - no MSA
123840834 5264 Brassicales-Malvales View MSA
124339399 5266 SBM View MSA
124237603 5268 Malvidae View MSA
124061873 5270 Rosid View MSA
123741043 5271 Pentapetalae View MSA
122789862 5272 Eudicot View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier