Gene : Brara.E01263 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR23076//PTHR23076:SF60 - METALLOPROTEASE M41 FTSH Genomic Order:  1263
Name:  ? Brara.E01263 Secondary Identifier:  ? PAC:30626209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01263 0.5kb upstream 0.5kb upstream 3212 true A05: 7691585-7694796 Brassica rapa FPsc
Brara.E01263 0.5kb upstream 0.5kb upstream 500 false A05: 7694297-7694796 Brassica rapa FPsc
Brara.E01263 0.5kb downstream 0.5kb downstream 3212 true A05: 7691085-7694296 Brassica rapa FPsc
Brara.E01263 0.5kb downstream 0.5kb downstream 500 false A05: 7691085-7691584 Brassica rapa FPsc
Brara.E01263 1.0kb upstream 1.0kb upstream 3712 true A05: 7691585-7695296 Brassica rapa FPsc
Brara.E01263 1.0kb upstream 1.0kb upstream 1000 false A05: 7694297-7695296 Brassica rapa FPsc
Brara.E01263 1.0kb downstream 1.0kb downstream 3712 true A05: 7690585-7694296 Brassica rapa FPsc
Brara.E01263 1.0kb downstream 1.0kb downstream 1000 false A05: 7690585-7691584 Brassica rapa FPsc
Brara.E01263 2.0kb upstream 2.0kb upstream 4712 true A05: 7691585-7696296 Brassica rapa FPsc
Brara.E01263 2.0kb upstream 2.0kb upstream 2000 false A05: 7694297-7696296 Brassica rapa FPsc
Brara.E01263 2.0kb downstream 2.0kb downstream 4712 true A05: 7689585-7694296 Brassica rapa FPsc
Brara.E01263 2.0kb downstream 2.0kb downstream 2000 false A05: 7689585-7691584 Brassica rapa FPsc
Brara.E01263 5.0kb upstream 5.0kb upstream 7712 true A05: 7691585-7699296 Brassica rapa FPsc
Brara.E01263 5.0kb upstream 5.0kb upstream 5000 false A05: 7694297-7699296 Brassica rapa FPsc
Brara.E01263 5.0kb downstream 5.0kb downstream 7712 true A05: 7686585-7694296 Brassica rapa FPsc
Brara.E01263 5.0kb downstream 5.0kb downstream 5000 false A05: 7686585-7691584 Brassica rapa FPsc
Brara.E01263 10.0kb upstream 10.0kb upstream 12712 true A05: 7691585-7704296 Brassica rapa FPsc
Brara.E01263 10.0kb upstream 10.0kb upstream 10000 false A05: 7694297-7704296 Brassica rapa FPsc
Brara.E01263 10.0kb downstream 10.0kb downstream 12712 true A05: 7681585-7694296 Brassica rapa FPsc
Brara.E01263 10.0kb downstream 10.0kb downstream 10000 false A05: 7681585-7691584 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374340 5261 Brassicaceae View MSA
123839956 5264 Brassicales-Malvales View MSA
124341395 5266 SBM View MSA
124239029 5268 Malvidae View MSA
124067047 5270 Rosid View MSA
123736542 5271 Pentapetalae View MSA
122790199 5272 Eudicot View MSA
122046550 5273 Angiosperm View MSA
121351325 5274 Embryophyte View MSA
123426403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier