Gene : Brara.I02311 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  2311
Name:  ? Brara.I02311 Secondary Identifier:  ? PAC:30641351
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5963 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02311 0.5kb upstream 0.5kb upstream 2461 true A09: 17825771-17828231 Brassica rapa FPsc
Brara.I02311 0.5kb upstream 0.5kb upstream 500 false A09: 17825771-17826270 Brassica rapa FPsc
Brara.I02311 0.5kb downstream 0.5kb downstream 2461 true A09: 17826271-17828731 Brassica rapa FPsc
Brara.I02311 0.5kb downstream 0.5kb downstream 500 false A09: 17828232-17828731 Brassica rapa FPsc
Brara.I02311 1.0kb upstream 1.0kb upstream 2961 true A09: 17825271-17828231 Brassica rapa FPsc
Brara.I02311 1.0kb upstream 1.0kb upstream 1000 false A09: 17825271-17826270 Brassica rapa FPsc
Brara.I02311 1.0kb downstream 1.0kb downstream 2961 true A09: 17826271-17829231 Brassica rapa FPsc
Brara.I02311 1.0kb downstream 1.0kb downstream 1000 false A09: 17828232-17829231 Brassica rapa FPsc
Brara.I02311 2.0kb upstream 2.0kb upstream 3961 true A09: 17824271-17828231 Brassica rapa FPsc
Brara.I02311 2.0kb upstream 2.0kb upstream 2000 false A09: 17824271-17826270 Brassica rapa FPsc
Brara.I02311 2.0kb downstream 2.0kb downstream 3961 true A09: 17826271-17830231 Brassica rapa FPsc
Brara.I02311 2.0kb downstream 2.0kb downstream 2000 false A09: 17828232-17830231 Brassica rapa FPsc
Brara.I02311 5.0kb upstream 5.0kb upstream 6961 true A09: 17821271-17828231 Brassica rapa FPsc
Brara.I02311 5.0kb upstream 5.0kb upstream 5000 false A09: 17821271-17826270 Brassica rapa FPsc
Brara.I02311 5.0kb downstream 5.0kb downstream 6961 true A09: 17826271-17833231 Brassica rapa FPsc
Brara.I02311 5.0kb downstream 5.0kb downstream 5000 false A09: 17828232-17833231 Brassica rapa FPsc
Brara.I02311 10.0kb upstream 10.0kb upstream 11961 true A09: 17816271-17828231 Brassica rapa FPsc
Brara.I02311 10.0kb upstream 10.0kb upstream 10000 false A09: 17816271-17826270 Brassica rapa FPsc
Brara.I02311 10.0kb downstream 10.0kb downstream 11961 true A09: 17826271-17838231 Brassica rapa FPsc
Brara.I02311 10.0kb downstream 10.0kb downstream 10000 false A09: 17828232-17838231 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365155 5261 Brassicaceae View MSA
123832296 5264 Brassicales-Malvales View MSA
124350481 5266 SBM View MSA
124237148 5268 Malvidae View MSA
124065334 5270 Rosid View MSA
123736927 5271 Pentapetalae View MSA
122792643 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier