Gene : Brara.B03141 B. rapa FPsc v1.3
Defline:  (1 of 58) PF01357//PF03330 - Pollen allergen (Pollen_allerg_1) // Rare lipoprotein A (RlpA)-like double-psi beta-barrel (DPBB_1) Genomic Order:  3141
Name:  ? Brara.B03141 Secondary Identifier:  ? PAC:30608577
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03141 0.5kb upstream 0.5kb upstream 2178 true A02: 26213549-26215726 Brassica rapa FPsc
Brara.B03141 0.5kb upstream 0.5kb upstream 500 false A02: 26215227-26215726 Brassica rapa FPsc
Brara.B03141 0.5kb downstream 0.5kb downstream 2178 true A02: 26213049-26215226 Brassica rapa FPsc
Brara.B03141 0.5kb downstream 0.5kb downstream 500 false A02: 26213049-26213548 Brassica rapa FPsc
Brara.B03141 1.0kb upstream 1.0kb upstream 2678 true A02: 26213549-26216226 Brassica rapa FPsc
Brara.B03141 1.0kb upstream 1.0kb upstream 1000 false A02: 26215227-26216226 Brassica rapa FPsc
Brara.B03141 1.0kb downstream 1.0kb downstream 2678 true A02: 26212549-26215226 Brassica rapa FPsc
Brara.B03141 1.0kb downstream 1.0kb downstream 1000 false A02: 26212549-26213548 Brassica rapa FPsc
Brara.B03141 2.0kb upstream 2.0kb upstream 3678 true A02: 26213549-26217226 Brassica rapa FPsc
Brara.B03141 2.0kb upstream 2.0kb upstream 2000 false A02: 26215227-26217226 Brassica rapa FPsc
Brara.B03141 2.0kb downstream 2.0kb downstream 3678 true A02: 26211549-26215226 Brassica rapa FPsc
Brara.B03141 2.0kb downstream 2.0kb downstream 2000 false A02: 26211549-26213548 Brassica rapa FPsc
Brara.B03141 5.0kb upstream 5.0kb upstream 6678 true A02: 26213549-26220226 Brassica rapa FPsc
Brara.B03141 5.0kb upstream 5.0kb upstream 5000 false A02: 26215227-26220226 Brassica rapa FPsc
Brara.B03141 5.0kb downstream 5.0kb downstream 6678 true A02: 26208549-26215226 Brassica rapa FPsc
Brara.B03141 5.0kb downstream 5.0kb downstream 5000 false A02: 26208549-26213548 Brassica rapa FPsc
Brara.B03141 10.0kb upstream 10.0kb upstream 11678 true A02: 26213549-26225226 Brassica rapa FPsc
Brara.B03141 10.0kb upstream 10.0kb upstream 10000 false A02: 26215227-26225226 Brassica rapa FPsc
Brara.B03141 10.0kb downstream 10.0kb downstream 11678 true A02: 26203549-26215226 Brassica rapa FPsc
Brara.B03141 10.0kb downstream 10.0kb downstream 10000 false A02: 26203549-26213548 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362837 5261 Brassicaceae View MSA
123838910 5264 Brassicales-Malvales View MSA
124350197 5266 SBM View MSA
124248581 5268 Malvidae View MSA
124072137 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier