Gene : Brara.I01922 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.6.1.13 - Ornithine aminotransferase / Ornithine--oxo-acid transaminase Genomic Order:  1922
Name:  ? Brara.I01922 Secondary Identifier:  ? PAC:30642026
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGASEDEG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ARGININE-SYN4-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ARG-PRO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc CITRULBIO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3341 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6922 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01922 0.5kb upstream 0.5kb upstream 2901 true A09: 13960774-13963674 Brassica rapa FPsc
Brara.I01922 0.5kb upstream 0.5kb upstream 500 false A09: 13963175-13963674 Brassica rapa FPsc
Brara.I01922 0.5kb downstream 0.5kb downstream 2901 true A09: 13960274-13963174 Brassica rapa FPsc
Brara.I01922 0.5kb downstream 0.5kb downstream 500 false A09: 13960274-13960773 Brassica rapa FPsc
Brara.I01922 1.0kb upstream 1.0kb upstream 3401 true A09: 13960774-13964174 Brassica rapa FPsc
Brara.I01922 1.0kb upstream 1.0kb upstream 1000 false A09: 13963175-13964174 Brassica rapa FPsc
Brara.I01922 1.0kb downstream 1.0kb downstream 3401 true A09: 13959774-13963174 Brassica rapa FPsc
Brara.I01922 1.0kb downstream 1.0kb downstream 1000 false A09: 13959774-13960773 Brassica rapa FPsc
Brara.I01922 2.0kb upstream 2.0kb upstream 4401 true A09: 13960774-13965174 Brassica rapa FPsc
Brara.I01922 2.0kb upstream 2.0kb upstream 2000 false A09: 13963175-13965174 Brassica rapa FPsc
Brara.I01922 2.0kb downstream 2.0kb downstream 4401 true A09: 13958774-13963174 Brassica rapa FPsc
Brara.I01922 2.0kb downstream 2.0kb downstream 2000 false A09: 13958774-13960773 Brassica rapa FPsc
Brara.I01922 5.0kb upstream 5.0kb upstream 7401 true A09: 13960774-13968174 Brassica rapa FPsc
Brara.I01922 5.0kb upstream 5.0kb upstream 5000 false A09: 13963175-13968174 Brassica rapa FPsc
Brara.I01922 5.0kb downstream 5.0kb downstream 7401 true A09: 13955774-13963174 Brassica rapa FPsc
Brara.I01922 5.0kb downstream 5.0kb downstream 5000 false A09: 13955774-13960773 Brassica rapa FPsc
Brara.I01922 10.0kb upstream 10.0kb upstream 12401 true A09: 13960774-13973174 Brassica rapa FPsc
Brara.I01922 10.0kb upstream 10.0kb upstream 10000 false A09: 13963175-13973174 Brassica rapa FPsc
Brara.I01922 10.0kb downstream 10.0kb downstream 12401 true A09: 13950774-13963174 Brassica rapa FPsc
Brara.I01922 10.0kb downstream 10.0kb downstream 10000 false A09: 13950774-13960773 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360278 5261 Brassicaceae View MSA
123833136 5264 Brassicales-Malvales View MSA
124343213 5266 SBM View MSA
124237215 5268 Malvidae View MSA
124066510 5270 Rosid View MSA
123747705 5271 Pentapetalae View MSA
122789437 5272 Eudicot View MSA
122044834 5273 Angiosperm View MSA
121345718 5274 Embryophyte View MSA
123423939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier