Gene : Brara.E01111 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR37173:SF1 - HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN Genomic Order:  1111
Name:  ? Brara.E01111 Secondary Identifier:  ? PAC:30626028
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01111 0.5kb upstream 0.5kb upstream 2468 true A05: 6591033-6593500 Brassica rapa FPsc
Brara.E01111 0.5kb upstream 0.5kb upstream 500 false A05: 6591033-6591532 Brassica rapa FPsc
Brara.E01111 0.5kb downstream 0.5kb downstream 2468 true A05: 6591533-6594000 Brassica rapa FPsc
Brara.E01111 0.5kb downstream 0.5kb downstream 500 false A05: 6593501-6594000 Brassica rapa FPsc
Brara.E01111 1.0kb upstream 1.0kb upstream 2968 true A05: 6590533-6593500 Brassica rapa FPsc
Brara.E01111 1.0kb upstream 1.0kb upstream 1000 false A05: 6590533-6591532 Brassica rapa FPsc
Brara.E01111 1.0kb downstream 1.0kb downstream 2968 true A05: 6591533-6594500 Brassica rapa FPsc
Brara.E01111 1.0kb downstream 1.0kb downstream 1000 false A05: 6593501-6594500 Brassica rapa FPsc
Brara.E01111 2.0kb upstream 2.0kb upstream 3968 true A05: 6589533-6593500 Brassica rapa FPsc
Brara.E01111 2.0kb upstream 2.0kb upstream 2000 false A05: 6589533-6591532 Brassica rapa FPsc
Brara.E01111 2.0kb downstream 2.0kb downstream 3968 true A05: 6591533-6595500 Brassica rapa FPsc
Brara.E01111 2.0kb downstream 2.0kb downstream 2000 false A05: 6593501-6595500 Brassica rapa FPsc
Brara.E01111 5.0kb upstream 5.0kb upstream 6968 true A05: 6586533-6593500 Brassica rapa FPsc
Brara.E01111 5.0kb upstream 5.0kb upstream 5000 false A05: 6586533-6591532 Brassica rapa FPsc
Brara.E01111 5.0kb downstream 5.0kb downstream 6968 true A05: 6591533-6598500 Brassica rapa FPsc
Brara.E01111 5.0kb downstream 5.0kb downstream 5000 false A05: 6593501-6598500 Brassica rapa FPsc
Brara.E01111 10.0kb upstream 10.0kb upstream 11968 true A05: 6581533-6593500 Brassica rapa FPsc
Brara.E01111 10.0kb upstream 10.0kb upstream 10000 false A05: 6581533-6591532 Brassica rapa FPsc
Brara.E01111 10.0kb downstream 10.0kb downstream 11968 true A05: 6591533-6603500 Brassica rapa FPsc
Brara.E01111 10.0kb downstream 10.0kb downstream 10000 false A05: 6593501-6603500 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363572 5261 Brassicaceae View MSA
123834376 5264 Brassicales-Malvales View MSA
124341089 5266 SBM View MSA
124250614 5268 Malvidae View MSA
124065426 5270 Rosid View MSA
123746195 5271 Pentapetalae View MSA
122787235 5272 Eudicot View MSA
122045095 5273 Angiosperm View MSA
121345714 5274 Embryophyte View MSA
123425917 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier