Gene : Brara.I01809 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR22874:SF4 - TRANSDUCIN/WD-40 REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  1809
Name:  ? Brara.I01809 Secondary Identifier:  ? PAC:30644867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01809 0.5kb upstream 0.5kb upstream 3697 true A09: 12634641-12638337 Brassica rapa FPsc
Brara.I01809 0.5kb upstream 0.5kb upstream 500 false A09: 12634641-12635140 Brassica rapa FPsc
Brara.I01809 0.5kb downstream 0.5kb downstream 3697 true A09: 12635141-12638837 Brassica rapa FPsc
Brara.I01809 0.5kb downstream 0.5kb downstream 500 false A09: 12638338-12638837 Brassica rapa FPsc
Brara.I01809 1.0kb upstream 1.0kb upstream 4197 true A09: 12634141-12638337 Brassica rapa FPsc
Brara.I01809 1.0kb upstream 1.0kb upstream 1000 false A09: 12634141-12635140 Brassica rapa FPsc
Brara.I01809 1.0kb downstream 1.0kb downstream 4197 true A09: 12635141-12639337 Brassica rapa FPsc
Brara.I01809 1.0kb downstream 1.0kb downstream 1000 false A09: 12638338-12639337 Brassica rapa FPsc
Brara.I01809 2.0kb upstream 2.0kb upstream 5197 true A09: 12633141-12638337 Brassica rapa FPsc
Brara.I01809 2.0kb upstream 2.0kb upstream 2000 false A09: 12633141-12635140 Brassica rapa FPsc
Brara.I01809 2.0kb downstream 2.0kb downstream 5197 true A09: 12635141-12640337 Brassica rapa FPsc
Brara.I01809 2.0kb downstream 2.0kb downstream 2000 false A09: 12638338-12640337 Brassica rapa FPsc
Brara.I01809 5.0kb upstream 5.0kb upstream 8197 true A09: 12630141-12638337 Brassica rapa FPsc
Brara.I01809 5.0kb upstream 5.0kb upstream 5000 false A09: 12630141-12635140 Brassica rapa FPsc
Brara.I01809 5.0kb downstream 5.0kb downstream 8197 true A09: 12635141-12643337 Brassica rapa FPsc
Brara.I01809 5.0kb downstream 5.0kb downstream 5000 false A09: 12638338-12643337 Brassica rapa FPsc
Brara.I01809 10.0kb upstream 10.0kb upstream 13197 true A09: 12625141-12638337 Brassica rapa FPsc
Brara.I01809 10.0kb upstream 10.0kb upstream 10000 false A09: 12625141-12635140 Brassica rapa FPsc
Brara.I01809 10.0kb downstream 10.0kb downstream 13197 true A09: 12635141-12648337 Brassica rapa FPsc
Brara.I01809 10.0kb downstream 10.0kb downstream 10000 false A09: 12638338-12648337 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121507103 5273 Angiosperm Singleton cluster - no MSA
122354258 5261 Brassicaceae Singleton cluster - no MSA
123792684 5264 Brassicales-Malvales Singleton cluster - no MSA
124290552 5266 SBM Singleton cluster - no MSA
124143666 5268 Malvidae Singleton cluster - no MSA
123870327 5270 Rosid Singleton cluster - no MSA
123454752 5271 Pentapetalae Singleton cluster - no MSA
122490194 5272 Eudicot Singleton cluster - no MSA
120780271 5274 Embryophyte Singleton cluster - no MSA
123426396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier