Gene : Brara.B02856 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12411:SF297 - CYSTEINE PROTEASE Genomic Order:  2856
Name:  ? Brara.B02856 Secondary Identifier:  ? PAC:30607003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B02856 0.5kb upstream 0.5kb upstream 2788 true A02: 22633081-22635868 Brassica rapa FPsc
Brara.B02856 0.5kb upstream 0.5kb upstream 500 false A02: 22633081-22633580 Brassica rapa FPsc
Brara.B02856 0.5kb downstream 0.5kb downstream 2788 true A02: 22633581-22636368 Brassica rapa FPsc
Brara.B02856 0.5kb downstream 0.5kb downstream 500 false A02: 22635869-22636368 Brassica rapa FPsc
Brara.B02856 1.0kb upstream 1.0kb upstream 3288 true A02: 22632581-22635868 Brassica rapa FPsc
Brara.B02856 1.0kb upstream 1.0kb upstream 1000 false A02: 22632581-22633580 Brassica rapa FPsc
Brara.B02856 1.0kb downstream 1.0kb downstream 3288 true A02: 22633581-22636868 Brassica rapa FPsc
Brara.B02856 1.0kb downstream 1.0kb downstream 1000 false A02: 22635869-22636868 Brassica rapa FPsc
Brara.B02856 2.0kb upstream 2.0kb upstream 4288 true A02: 22631581-22635868 Brassica rapa FPsc
Brara.B02856 2.0kb upstream 2.0kb upstream 2000 false A02: 22631581-22633580 Brassica rapa FPsc
Brara.B02856 2.0kb downstream 2.0kb downstream 4288 true A02: 22633581-22637868 Brassica rapa FPsc
Brara.B02856 2.0kb downstream 2.0kb downstream 2000 false A02: 22635869-22637868 Brassica rapa FPsc
Brara.B02856 5.0kb upstream 5.0kb upstream 7288 true A02: 22628581-22635868 Brassica rapa FPsc
Brara.B02856 5.0kb upstream 5.0kb upstream 5000 false A02: 22628581-22633580 Brassica rapa FPsc
Brara.B02856 5.0kb downstream 5.0kb downstream 7288 true A02: 22633581-22640868 Brassica rapa FPsc
Brara.B02856 5.0kb downstream 5.0kb downstream 5000 false A02: 22635869-22640868 Brassica rapa FPsc
Brara.B02856 10.0kb upstream 10.0kb upstream 12288 true A02: 22623581-22635868 Brassica rapa FPsc
Brara.B02856 10.0kb upstream 10.0kb upstream 10000 false A02: 22623581-22633580 Brassica rapa FPsc
Brara.B02856 10.0kb downstream 10.0kb downstream 12288 true A02: 22633581-22645868 Brassica rapa FPsc
Brara.B02856 10.0kb downstream 10.0kb downstream 10000 false A02: 22635869-22645868 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369375 5261 Brassicaceae View MSA
123836594 5264 Brassicales-Malvales View MSA
124348430 5266 SBM View MSA
124254446 5268 Malvidae View MSA
124074647 5270 Rosid View MSA
123752467 5271 Pentapetalae View MSA
122797682 5272 Eudicot View MSA
122051193 5273 Angiosperm View MSA
121348840 5274 Embryophyte View MSA
123426788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier