Gene : Brara.I01710 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Genomic Order:  1710
Name:  ? Brara.I01710 Secondary Identifier:  ? PAC:30646500
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I01710 0.5kb upstream 0.5kb upstream 4268 true A09: 11700120-11704387 Brassica rapa FPsc
Brara.I01710 0.5kb upstream 0.5kb upstream 500 false A09: 11700120-11700619 Brassica rapa FPsc
Brara.I01710 0.5kb downstream 0.5kb downstream 4268 true A09: 11700620-11704887 Brassica rapa FPsc
Brara.I01710 0.5kb downstream 0.5kb downstream 500 false A09: 11704388-11704887 Brassica rapa FPsc
Brara.I01710 1.0kb upstream 1.0kb upstream 4768 true A09: 11699620-11704387 Brassica rapa FPsc
Brara.I01710 1.0kb upstream 1.0kb upstream 1000 false A09: 11699620-11700619 Brassica rapa FPsc
Brara.I01710 1.0kb downstream 1.0kb downstream 4768 true A09: 11700620-11705387 Brassica rapa FPsc
Brara.I01710 1.0kb downstream 1.0kb downstream 1000 false A09: 11704388-11705387 Brassica rapa FPsc
Brara.I01710 2.0kb upstream 2.0kb upstream 5768 true A09: 11698620-11704387 Brassica rapa FPsc
Brara.I01710 2.0kb upstream 2.0kb upstream 2000 false A09: 11698620-11700619 Brassica rapa FPsc
Brara.I01710 2.0kb downstream 2.0kb downstream 5768 true A09: 11700620-11706387 Brassica rapa FPsc
Brara.I01710 2.0kb downstream 2.0kb downstream 2000 false A09: 11704388-11706387 Brassica rapa FPsc
Brara.I01710 5.0kb upstream 5.0kb upstream 8768 true A09: 11695620-11704387 Brassica rapa FPsc
Brara.I01710 5.0kb upstream 5.0kb upstream 5000 false A09: 11695620-11700619 Brassica rapa FPsc
Brara.I01710 5.0kb downstream 5.0kb downstream 8768 true A09: 11700620-11709387 Brassica rapa FPsc
Brara.I01710 5.0kb downstream 5.0kb downstream 5000 false A09: 11704388-11709387 Brassica rapa FPsc
Brara.I01710 10.0kb upstream 10.0kb upstream 13768 true A09: 11690620-11704387 Brassica rapa FPsc
Brara.I01710 10.0kb upstream 10.0kb upstream 10000 false A09: 11690620-11700619 Brassica rapa FPsc
Brara.I01710 10.0kb downstream 10.0kb downstream 13768 true A09: 11700620-11714387 Brassica rapa FPsc
Brara.I01710 10.0kb downstream 10.0kb downstream 10000 false A09: 11704388-11714387 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354666 5261 Brassicaceae Singleton cluster - no MSA
123840872 5264 Brassicales-Malvales View MSA
124348014 5266 SBM View MSA
124245951 5268 Malvidae View MSA
124063703 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier