Gene : Brara.E01531 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR31707:SF55 - PECTINESTERASE 2-RELATED Genomic Order:  1531
Name:  ? Brara.E01531 Secondary Identifier:  ? PAC:30624948
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01531 0.5kb upstream 0.5kb upstream 2924 true A05: 10023649-10026572 Brassica rapa FPsc
Brara.E01531 0.5kb upstream 0.5kb upstream 500 false A05: 10026073-10026572 Brassica rapa FPsc
Brara.E01531 0.5kb downstream 0.5kb downstream 2924 true A05: 10023149-10026072 Brassica rapa FPsc
Brara.E01531 0.5kb downstream 0.5kb downstream 500 false A05: 10023149-10023648 Brassica rapa FPsc
Brara.E01531 1.0kb upstream 1.0kb upstream 3424 true A05: 10023649-10027072 Brassica rapa FPsc
Brara.E01531 1.0kb upstream 1.0kb upstream 1000 false A05: 10026073-10027072 Brassica rapa FPsc
Brara.E01531 1.0kb downstream 1.0kb downstream 3424 true A05: 10022649-10026072 Brassica rapa FPsc
Brara.E01531 1.0kb downstream 1.0kb downstream 1000 false A05: 10022649-10023648 Brassica rapa FPsc
Brara.E01531 2.0kb upstream 2.0kb upstream 4424 true A05: 10023649-10028072 Brassica rapa FPsc
Brara.E01531 2.0kb upstream 2.0kb upstream 2000 false A05: 10026073-10028072 Brassica rapa FPsc
Brara.E01531 2.0kb downstream 2.0kb downstream 4424 true A05: 10021649-10026072 Brassica rapa FPsc
Brara.E01531 2.0kb downstream 2.0kb downstream 2000 false A05: 10021649-10023648 Brassica rapa FPsc
Brara.E01531 5.0kb upstream 5.0kb upstream 7424 true A05: 10023649-10031072 Brassica rapa FPsc
Brara.E01531 5.0kb upstream 5.0kb upstream 5000 false A05: 10026073-10031072 Brassica rapa FPsc
Brara.E01531 5.0kb downstream 5.0kb downstream 7424 true A05: 10018649-10026072 Brassica rapa FPsc
Brara.E01531 5.0kb downstream 5.0kb downstream 5000 false A05: 10018649-10023648 Brassica rapa FPsc
Brara.E01531 10.0kb upstream 10.0kb upstream 12424 true A05: 10023649-10036072 Brassica rapa FPsc
Brara.E01531 10.0kb upstream 10.0kb upstream 10000 false A05: 10026073-10036072 Brassica rapa FPsc
Brara.E01531 10.0kb downstream 10.0kb downstream 12424 true A05: 10013649-10026072 Brassica rapa FPsc
Brara.E01531 10.0kb downstream 10.0kb downstream 10000 false A05: 10013649-10023648 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365332 5261 Brassicaceae View MSA
123841223 5264 Brassicales-Malvales View MSA
124350468 5266 SBM View MSA
124246887 5268 Malvidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier