Gene : Brara.I03597 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11817//PTHR11817:SF33 - PYRUVATE KINASE Genomic Order:  3597
Name:  ? Brara.I03597 Secondary Identifier:  ? PAC:30642710
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ANAEROFRUCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ANAGLYCOLYSIS-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03597 0.5kb upstream 0.5kb upstream 4128 true A09: 33609688-33613815 Brassica rapa FPsc
Brara.I03597 0.5kb upstream 0.5kb upstream 500 false A09: 33609688-33610187 Brassica rapa FPsc
Brara.I03597 0.5kb downstream 0.5kb downstream 4128 true A09: 33610188-33614315 Brassica rapa FPsc
Brara.I03597 0.5kb downstream 0.5kb downstream 500 false A09: 33613816-33614315 Brassica rapa FPsc
Brara.I03597 1.0kb upstream 1.0kb upstream 4628 true A09: 33609188-33613815 Brassica rapa FPsc
Brara.I03597 1.0kb upstream 1.0kb upstream 1000 false A09: 33609188-33610187 Brassica rapa FPsc
Brara.I03597 1.0kb downstream 1.0kb downstream 4628 true A09: 33610188-33614815 Brassica rapa FPsc
Brara.I03597 1.0kb downstream 1.0kb downstream 1000 false A09: 33613816-33614815 Brassica rapa FPsc
Brara.I03597 2.0kb upstream 2.0kb upstream 5628 true A09: 33608188-33613815 Brassica rapa FPsc
Brara.I03597 2.0kb upstream 2.0kb upstream 2000 false A09: 33608188-33610187 Brassica rapa FPsc
Brara.I03597 2.0kb downstream 2.0kb downstream 5628 true A09: 33610188-33615815 Brassica rapa FPsc
Brara.I03597 2.0kb downstream 2.0kb downstream 2000 false A09: 33613816-33615815 Brassica rapa FPsc
Brara.I03597 5.0kb upstream 5.0kb upstream 8628 true A09: 33605188-33613815 Brassica rapa FPsc
Brara.I03597 5.0kb upstream 5.0kb upstream 5000 false A09: 33605188-33610187 Brassica rapa FPsc
Brara.I03597 5.0kb downstream 5.0kb downstream 8628 true A09: 33610188-33618815 Brassica rapa FPsc
Brara.I03597 5.0kb downstream 5.0kb downstream 5000 false A09: 33613816-33618815 Brassica rapa FPsc
Brara.I03597 10.0kb upstream 10.0kb upstream 13628 true A09: 33600188-33613815 Brassica rapa FPsc
Brara.I03597 10.0kb upstream 10.0kb upstream 10000 false A09: 33600188-33610187 Brassica rapa FPsc
Brara.I03597 10.0kb downstream 10.0kb downstream 13628 true A09: 33610188-33623815 Brassica rapa FPsc
Brara.I03597 10.0kb downstream 10.0kb downstream 10000 false A09: 33613816-33623815 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379911 5261 Brassicaceae View MSA
123839460 5264 Brassicales-Malvales View MSA
124343520 5266 SBM View MSA
124237708 5268 Malvidae View MSA
124072405 5270 Rosid View MSA
123746399 5271 Pentapetalae View MSA
122796515 5272 Eudicot View MSA
122046004 5273 Angiosperm View MSA
121344818 5274 Embryophyte View MSA
123427832 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier