Gene : Brara.E01533 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR14155:SF99 - RING-H2 FINGER PROTEIN ATL3 Genomic Order:  1533
Name:  ? Brara.E01533 Secondary Identifier:  ? PAC:30624749
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01533 0.5kb upstream 0.5kb upstream 1448 true A05: 10038306-10039753 Brassica rapa FPsc
Brara.E01533 0.5kb upstream 0.5kb upstream 500 false A05: 10039254-10039753 Brassica rapa FPsc
Brara.E01533 0.5kb downstream 0.5kb downstream 1448 true A05: 10037806-10039253 Brassica rapa FPsc
Brara.E01533 0.5kb downstream 0.5kb downstream 500 false A05: 10037806-10038305 Brassica rapa FPsc
Brara.E01533 1.0kb upstream 1.0kb upstream 1948 true A05: 10038306-10040253 Brassica rapa FPsc
Brara.E01533 1.0kb upstream 1.0kb upstream 1000 false A05: 10039254-10040253 Brassica rapa FPsc
Brara.E01533 1.0kb downstream 1.0kb downstream 1948 true A05: 10037306-10039253 Brassica rapa FPsc
Brara.E01533 1.0kb downstream 1.0kb downstream 1000 false A05: 10037306-10038305 Brassica rapa FPsc
Brara.E01533 2.0kb upstream 2.0kb upstream 2948 true A05: 10038306-10041253 Brassica rapa FPsc
Brara.E01533 2.0kb upstream 2.0kb upstream 2000 false A05: 10039254-10041253 Brassica rapa FPsc
Brara.E01533 2.0kb downstream 2.0kb downstream 2948 true A05: 10036306-10039253 Brassica rapa FPsc
Brara.E01533 2.0kb downstream 2.0kb downstream 2000 false A05: 10036306-10038305 Brassica rapa FPsc
Brara.E01533 5.0kb upstream 5.0kb upstream 5948 true A05: 10038306-10044253 Brassica rapa FPsc
Brara.E01533 5.0kb upstream 5.0kb upstream 5000 false A05: 10039254-10044253 Brassica rapa FPsc
Brara.E01533 5.0kb downstream 5.0kb downstream 5948 true A05: 10033306-10039253 Brassica rapa FPsc
Brara.E01533 5.0kb downstream 5.0kb downstream 5000 false A05: 10033306-10038305 Brassica rapa FPsc
Brara.E01533 10.0kb upstream 10.0kb upstream 10948 true A05: 10038306-10049253 Brassica rapa FPsc
Brara.E01533 10.0kb upstream 10.0kb upstream 10000 false A05: 10039254-10049253 Brassica rapa FPsc
Brara.E01533 10.0kb downstream 10.0kb downstream 10948 true A05: 10028306-10039253 Brassica rapa FPsc
Brara.E01533 10.0kb downstream 10.0kb downstream 10000 false A05: 10028306-10038305 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371206 5261 Brassicaceae View MSA
123838599 5264 Brassicales-Malvales View MSA
124337079 5266 SBM View MSA
124239102 5268 Malvidae View MSA
124069328 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier