Gene : Brara.I03617 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  3617
Name:  ? Brara.I03617 Secondary Identifier:  ? PAC:30645645
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY1F-467 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7186 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03617 0.5kb upstream 0.5kb upstream 3297 true A09: 33751181-33754477 Brassica rapa FPsc
Brara.I03617 0.5kb upstream 0.5kb upstream 500 false A09: 33753978-33754477 Brassica rapa FPsc
Brara.I03617 0.5kb downstream 0.5kb downstream 3297 true A09: 33750681-33753977 Brassica rapa FPsc
Brara.I03617 0.5kb downstream 0.5kb downstream 500 false A09: 33750681-33751180 Brassica rapa FPsc
Brara.I03617 1.0kb upstream 1.0kb upstream 3797 true A09: 33751181-33754977 Brassica rapa FPsc
Brara.I03617 1.0kb upstream 1.0kb upstream 1000 false A09: 33753978-33754977 Brassica rapa FPsc
Brara.I03617 1.0kb downstream 1.0kb downstream 3797 true A09: 33750181-33753977 Brassica rapa FPsc
Brara.I03617 1.0kb downstream 1.0kb downstream 1000 false A09: 33750181-33751180 Brassica rapa FPsc
Brara.I03617 2.0kb upstream 2.0kb upstream 4797 true A09: 33751181-33755977 Brassica rapa FPsc
Brara.I03617 2.0kb upstream 2.0kb upstream 2000 false A09: 33753978-33755977 Brassica rapa FPsc
Brara.I03617 2.0kb downstream 2.0kb downstream 4797 true A09: 33749181-33753977 Brassica rapa FPsc
Brara.I03617 2.0kb downstream 2.0kb downstream 2000 false A09: 33749181-33751180 Brassica rapa FPsc
Brara.I03617 5.0kb upstream 5.0kb upstream 7797 true A09: 33751181-33758977 Brassica rapa FPsc
Brara.I03617 5.0kb upstream 5.0kb upstream 5000 false A09: 33753978-33758977 Brassica rapa FPsc
Brara.I03617 5.0kb downstream 5.0kb downstream 7797 true A09: 33746181-33753977 Brassica rapa FPsc
Brara.I03617 5.0kb downstream 5.0kb downstream 5000 false A09: 33746181-33751180 Brassica rapa FPsc
Brara.I03617 10.0kb upstream 10.0kb upstream 12797 true A09: 33751181-33763977 Brassica rapa FPsc
Brara.I03617 10.0kb upstream 10.0kb upstream 10000 false A09: 33753978-33763977 Brassica rapa FPsc
Brara.I03617 10.0kb downstream 10.0kb downstream 12797 true A09: 33741181-33753977 Brassica rapa FPsc
Brara.I03617 10.0kb downstream 10.0kb downstream 10000 false A09: 33741181-33751180 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363433 5261 Brassicaceae View MSA
123839790 5264 Brassicales-Malvales View MSA
124346801 5266 SBM View MSA
124254509 5268 Malvidae View MSA
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier