Gene : Brara.B03541 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10457:SF4 - MEVALONATE KINASE Genomic Order:  3541
Name:  ? Brara.B03541 Secondary Identifier:  ? PAC:30609511
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5910 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-922 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03541 0.5kb upstream 0.5kb upstream 2801 true A02: 29488134-29490934 Brassica rapa FPsc
Brara.B03541 0.5kb upstream 0.5kb upstream 500 false A02: 29488134-29488633 Brassica rapa FPsc
Brara.B03541 0.5kb downstream 0.5kb downstream 2801 true A02: 29488634-29491434 Brassica rapa FPsc
Brara.B03541 0.5kb downstream 0.5kb downstream 500 false A02: 29490935-29491434 Brassica rapa FPsc
Brara.B03541 1.0kb upstream 1.0kb upstream 3301 true A02: 29487634-29490934 Brassica rapa FPsc
Brara.B03541 1.0kb upstream 1.0kb upstream 1000 false A02: 29487634-29488633 Brassica rapa FPsc
Brara.B03541 1.0kb downstream 1.0kb downstream 3301 true A02: 29488634-29491934 Brassica rapa FPsc
Brara.B03541 1.0kb downstream 1.0kb downstream 1000 false A02: 29490935-29491934 Brassica rapa FPsc
Brara.B03541 2.0kb upstream 2.0kb upstream 4301 true A02: 29486634-29490934 Brassica rapa FPsc
Brara.B03541 2.0kb upstream 2.0kb upstream 2000 false A02: 29486634-29488633 Brassica rapa FPsc
Brara.B03541 2.0kb downstream 2.0kb downstream 4301 true A02: 29488634-29492934 Brassica rapa FPsc
Brara.B03541 2.0kb downstream 2.0kb downstream 2000 false A02: 29490935-29492934 Brassica rapa FPsc
Brara.B03541 5.0kb upstream 5.0kb upstream 7301 true A02: 29483634-29490934 Brassica rapa FPsc
Brara.B03541 5.0kb upstream 5.0kb upstream 5000 false A02: 29483634-29488633 Brassica rapa FPsc
Brara.B03541 5.0kb downstream 5.0kb downstream 7301 true A02: 29488634-29495934 Brassica rapa FPsc
Brara.B03541 5.0kb downstream 5.0kb downstream 5000 false A02: 29490935-29495934 Brassica rapa FPsc
Brara.B03541 10.0kb upstream 10.0kb upstream 12301 true A02: 29478634-29490934 Brassica rapa FPsc
Brara.B03541 10.0kb upstream 10.0kb upstream 10000 false A02: 29478634-29488633 Brassica rapa FPsc
Brara.B03541 10.0kb downstream 10.0kb downstream 12301 true A02: 29488634-29500934 Brassica rapa FPsc
Brara.B03541 10.0kb downstream 10.0kb downstream 10000 false A02: 29490935-29500934 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041242 5273 Angiosperm View MSA
122345312 5261 Brassicaceae Singleton cluster - no MSA
123840116 5264 Brassicales-Malvales View MSA
124346036 5266 SBM View MSA
124238701 5268 Malvidae View MSA
124063522 5270 Rosid View MSA
123737750 5271 Pentapetalae View MSA
122787384 5272 Eudicot View MSA
121345229 5274 Embryophyte View MSA
123380177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier