Gene : Brara.I03246 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.3.2.2//2.6.1.2//2.6.1.4//2.6.1.44 - Gamma-glutamyltransferase / Glutamyl transpeptidase // Alanine transaminase / Glutamic--pyruvic transaminase // Glycine transaminase / Glycine aminotransferase // Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase Genomic Order:  3246
Name:  ? Brara.I03246 Secondary Identifier:  ? PAC:30642442
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ALANINE-DEG3-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ALANINE-SYN2-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLYSYN-ALA-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7117 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03246 0.5kb upstream 0.5kb upstream 3650 true A09: 31035233-31038882 Brassica rapa FPsc
Brara.I03246 0.5kb upstream 0.5kb upstream 500 false A09: 31035233-31035732 Brassica rapa FPsc
Brara.I03246 0.5kb downstream 0.5kb downstream 3650 true A09: 31035733-31039382 Brassica rapa FPsc
Brara.I03246 0.5kb downstream 0.5kb downstream 500 false A09: 31038883-31039382 Brassica rapa FPsc
Brara.I03246 1.0kb upstream 1.0kb upstream 4150 true A09: 31034733-31038882 Brassica rapa FPsc
Brara.I03246 1.0kb upstream 1.0kb upstream 1000 false A09: 31034733-31035732 Brassica rapa FPsc
Brara.I03246 1.0kb downstream 1.0kb downstream 4150 true A09: 31035733-31039882 Brassica rapa FPsc
Brara.I03246 1.0kb downstream 1.0kb downstream 1000 false A09: 31038883-31039882 Brassica rapa FPsc
Brara.I03246 2.0kb upstream 2.0kb upstream 5150 true A09: 31033733-31038882 Brassica rapa FPsc
Brara.I03246 2.0kb upstream 2.0kb upstream 2000 false A09: 31033733-31035732 Brassica rapa FPsc
Brara.I03246 2.0kb downstream 2.0kb downstream 5150 true A09: 31035733-31040882 Brassica rapa FPsc
Brara.I03246 2.0kb downstream 2.0kb downstream 2000 false A09: 31038883-31040882 Brassica rapa FPsc
Brara.I03246 5.0kb upstream 5.0kb upstream 8150 true A09: 31030733-31038882 Brassica rapa FPsc
Brara.I03246 5.0kb upstream 5.0kb upstream 5000 false A09: 31030733-31035732 Brassica rapa FPsc
Brara.I03246 5.0kb downstream 5.0kb downstream 8150 true A09: 31035733-31043882 Brassica rapa FPsc
Brara.I03246 5.0kb downstream 5.0kb downstream 5000 false A09: 31038883-31043882 Brassica rapa FPsc
Brara.I03246 10.0kb upstream 10.0kb upstream 13150 true A09: 31025733-31038882 Brassica rapa FPsc
Brara.I03246 10.0kb upstream 10.0kb upstream 10000 false A09: 31025733-31035732 Brassica rapa FPsc
Brara.I03246 10.0kb downstream 10.0kb downstream 13150 true A09: 31035733-31048882 Brassica rapa FPsc
Brara.I03246 10.0kb downstream 10.0kb downstream 10000 false A09: 31038883-31048882 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353686 5261 Brassicaceae Singleton cluster - no MSA
123792213 5264 Brassicales-Malvales Singleton cluster - no MSA
124290097 5266 SBM Singleton cluster - no MSA
124143300 5268 Malvidae Singleton cluster - no MSA
123870038 5270 Rosid Singleton cluster - no MSA
123454507 5271 Pentapetalae Singleton cluster - no MSA
122489953 5272 Eudicot Singleton cluster - no MSA
122043472 5273 Angiosperm View MSA
121347513 5274 Embryophyte View MSA
123427750 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier