Gene : Brara.B03594 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR22931:SF2 - PHOSPHOGLUCAN, WATER DIKINASE, CHLOROPLASTIC Genomic Order:  3594
Name:  ? Brara.B03594 Secondary Identifier:  ? PAC:30609698
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6724 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03594 0.5kb upstream 0.5kb upstream 6808 true A02: 29836407-29843214 Brassica rapa FPsc
Brara.B03594 0.5kb upstream 0.5kb upstream 500 false A02: 29836407-29836906 Brassica rapa FPsc
Brara.B03594 0.5kb downstream 0.5kb downstream 6808 true A02: 29836907-29843714 Brassica rapa FPsc
Brara.B03594 0.5kb downstream 0.5kb downstream 500 false A02: 29843215-29843714 Brassica rapa FPsc
Brara.B03594 1.0kb upstream 1.0kb upstream 7308 true A02: 29835907-29843214 Brassica rapa FPsc
Brara.B03594 1.0kb upstream 1.0kb upstream 1000 false A02: 29835907-29836906 Brassica rapa FPsc
Brara.B03594 1.0kb downstream 1.0kb downstream 7308 true A02: 29836907-29844214 Brassica rapa FPsc
Brara.B03594 1.0kb downstream 1.0kb downstream 1000 false A02: 29843215-29844214 Brassica rapa FPsc
Brara.B03594 2.0kb upstream 2.0kb upstream 8308 true A02: 29834907-29843214 Brassica rapa FPsc
Brara.B03594 2.0kb upstream 2.0kb upstream 2000 false A02: 29834907-29836906 Brassica rapa FPsc
Brara.B03594 2.0kb downstream 2.0kb downstream 8308 true A02: 29836907-29845214 Brassica rapa FPsc
Brara.B03594 2.0kb downstream 2.0kb downstream 2000 false A02: 29843215-29845214 Brassica rapa FPsc
Brara.B03594 5.0kb upstream 5.0kb upstream 11308 true A02: 29831907-29843214 Brassica rapa FPsc
Brara.B03594 5.0kb upstream 5.0kb upstream 5000 false A02: 29831907-29836906 Brassica rapa FPsc
Brara.B03594 5.0kb downstream 5.0kb downstream 11308 true A02: 29836907-29848214 Brassica rapa FPsc
Brara.B03594 5.0kb downstream 5.0kb downstream 5000 false A02: 29843215-29848214 Brassica rapa FPsc
Brara.B03594 10.0kb upstream 10.0kb upstream 16308 true A02: 29826907-29843214 Brassica rapa FPsc
Brara.B03594 10.0kb upstream 10.0kb upstream 10000 false A02: 29826907-29836906 Brassica rapa FPsc
Brara.B03594 10.0kb downstream 10.0kb downstream 16308 true A02: 29836907-29853214 Brassica rapa FPsc
Brara.B03594 10.0kb downstream 10.0kb downstream 10000 false A02: 29843215-29853214 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345374 5261 Brassicaceae Singleton cluster - no MSA
123839557 5264 Brassicales-Malvales View MSA
124322620 5266 SBM View MSA
124239588 5268 Malvidae View MSA
124062057 5270 Rosid View MSA
123736948 5271 Pentapetalae View MSA
122793244 5272 Eudicot View MSA
122044534 5273 Angiosperm View MSA
121350283 5274 Embryophyte View MSA
123428238 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier