Gene : Brara.E01458 B. rapa FPsc v1.3
Defline:  (1 of 9) PTHR22763:SF59 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRP15 Genomic Order:  1458
Name:  ? Brara.E01458 Secondary Identifier:  ? PAC:30625597
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01458 0.5kb upstream 0.5kb upstream 2241 true A05: 9385570-9387810 Brassica rapa FPsc
Brara.E01458 0.5kb upstream 0.5kb upstream 500 false A05: 9385570-9386069 Brassica rapa FPsc
Brara.E01458 0.5kb downstream 0.5kb downstream 2241 true A05: 9386070-9388310 Brassica rapa FPsc
Brara.E01458 0.5kb downstream 0.5kb downstream 500 false A05: 9387811-9388310 Brassica rapa FPsc
Brara.E01458 1.0kb upstream 1.0kb upstream 2741 true A05: 9385070-9387810 Brassica rapa FPsc
Brara.E01458 1.0kb upstream 1.0kb upstream 1000 false A05: 9385070-9386069 Brassica rapa FPsc
Brara.E01458 1.0kb downstream 1.0kb downstream 2741 true A05: 9386070-9388810 Brassica rapa FPsc
Brara.E01458 1.0kb downstream 1.0kb downstream 1000 false A05: 9387811-9388810 Brassica rapa FPsc
Brara.E01458 2.0kb upstream 2.0kb upstream 3741 true A05: 9384070-9387810 Brassica rapa FPsc
Brara.E01458 2.0kb upstream 2.0kb upstream 2000 false A05: 9384070-9386069 Brassica rapa FPsc
Brara.E01458 2.0kb downstream 2.0kb downstream 3741 true A05: 9386070-9389810 Brassica rapa FPsc
Brara.E01458 2.0kb downstream 2.0kb downstream 2000 false A05: 9387811-9389810 Brassica rapa FPsc
Brara.E01458 5.0kb upstream 5.0kb upstream 6741 true A05: 9381070-9387810 Brassica rapa FPsc
Brara.E01458 5.0kb upstream 5.0kb upstream 5000 false A05: 9381070-9386069 Brassica rapa FPsc
Brara.E01458 5.0kb downstream 5.0kb downstream 6741 true A05: 9386070-9392810 Brassica rapa FPsc
Brara.E01458 5.0kb downstream 5.0kb downstream 5000 false A05: 9387811-9392810 Brassica rapa FPsc
Brara.E01458 10.0kb upstream 10.0kb upstream 11741 true A05: 9376070-9387810 Brassica rapa FPsc
Brara.E01458 10.0kb upstream 10.0kb upstream 10000 false A05: 9376070-9386069 Brassica rapa FPsc
Brara.E01458 10.0kb downstream 10.0kb downstream 11741 true A05: 9386070-9397810 Brassica rapa FPsc
Brara.E01458 10.0kb downstream 10.0kb downstream 10000 false A05: 9387811-9397810 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375687 5261 Brassicaceae View MSA
123801026 5264 Brassicales-Malvales View MSA
124298373 5266 SBM View MSA
124150029 5268 Malvidae View MSA
124061654 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier