Gene : Brara.B03627 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21319:SF15 - CHY AND CTCHY AND RING-TYPE ZINC FINGER PROTEIN Genomic Order:  3627
Name:  ? Brara.B03627 Secondary Identifier:  ? PAC:30608137
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03627 0.5kb upstream 0.5kb upstream 4092 true A02: 30047630-30051721 Brassica rapa FPsc
Brara.B03627 0.5kb upstream 0.5kb upstream 500 false A02: 30051222-30051721 Brassica rapa FPsc
Brara.B03627 0.5kb downstream 0.5kb downstream 4092 true A02: 30047130-30051221 Brassica rapa FPsc
Brara.B03627 0.5kb downstream 0.5kb downstream 500 false A02: 30047130-30047629 Brassica rapa FPsc
Brara.B03627 1.0kb upstream 1.0kb upstream 4592 true A02: 30047630-30052221 Brassica rapa FPsc
Brara.B03627 1.0kb upstream 1.0kb upstream 1000 false A02: 30051222-30052221 Brassica rapa FPsc
Brara.B03627 1.0kb downstream 1.0kb downstream 4592 true A02: 30046630-30051221 Brassica rapa FPsc
Brara.B03627 1.0kb downstream 1.0kb downstream 1000 false A02: 30046630-30047629 Brassica rapa FPsc
Brara.B03627 2.0kb upstream 2.0kb upstream 5592 true A02: 30047630-30053221 Brassica rapa FPsc
Brara.B03627 2.0kb upstream 2.0kb upstream 2000 false A02: 30051222-30053221 Brassica rapa FPsc
Brara.B03627 2.0kb downstream 2.0kb downstream 5592 true A02: 30045630-30051221 Brassica rapa FPsc
Brara.B03627 2.0kb downstream 2.0kb downstream 2000 false A02: 30045630-30047629 Brassica rapa FPsc
Brara.B03627 5.0kb upstream 5.0kb upstream 8592 true A02: 30047630-30056221 Brassica rapa FPsc
Brara.B03627 5.0kb upstream 5.0kb upstream 5000 false A02: 30051222-30056221 Brassica rapa FPsc
Brara.B03627 5.0kb downstream 5.0kb downstream 8592 true A02: 30042630-30051221 Brassica rapa FPsc
Brara.B03627 5.0kb downstream 5.0kb downstream 5000 false A02: 30042630-30047629 Brassica rapa FPsc
Brara.B03627 10.0kb upstream 10.0kb upstream 13592 true A02: 30047630-30061221 Brassica rapa FPsc
Brara.B03627 10.0kb upstream 10.0kb upstream 10000 false A02: 30051222-30061221 Brassica rapa FPsc
Brara.B03627 10.0kb downstream 10.0kb downstream 13592 true A02: 30037630-30051221 Brassica rapa FPsc
Brara.B03627 10.0kb downstream 10.0kb downstream 10000 false A02: 30037630-30047629 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370705 5261 Brassicaceae View MSA
123829618 5264 Brassicales-Malvales View MSA
124343160 5266 SBM View MSA
124241471 5268 Malvidae View MSA
124071418 5270 Rosid View MSA
123749462 5271 Pentapetalae View MSA
122791717 5272 Eudicot View MSA
122045456 5273 Angiosperm View MSA
123428990 5275 Viridiplantae View MSA
121347733 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier