Gene : Brara.B03408 B. rapa FPsc v1.3
Defline:  (1 of 3) 5.4.2.12 - Phosphoglycerate mutase (2,3-diphosphoglycerate-independent) / Phosphoglyceromutase Genomic Order:  3408
Name:  ? Brara.B03408 Secondary Identifier:  ? PAC:30607525
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-1042 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03408 0.5kb upstream 0.5kb upstream 3590 true A02: 28533642-28537231 Brassica rapa FPsc
Brara.B03408 0.5kb upstream 0.5kb upstream 500 false A02: 28533642-28534141 Brassica rapa FPsc
Brara.B03408 0.5kb downstream 0.5kb downstream 3590 true A02: 28534142-28537731 Brassica rapa FPsc
Brara.B03408 0.5kb downstream 0.5kb downstream 500 false A02: 28537232-28537731 Brassica rapa FPsc
Brara.B03408 1.0kb upstream 1.0kb upstream 4090 true A02: 28533142-28537231 Brassica rapa FPsc
Brara.B03408 1.0kb upstream 1.0kb upstream 1000 false A02: 28533142-28534141 Brassica rapa FPsc
Brara.B03408 1.0kb downstream 1.0kb downstream 4090 true A02: 28534142-28538231 Brassica rapa FPsc
Brara.B03408 1.0kb downstream 1.0kb downstream 1000 false A02: 28537232-28538231 Brassica rapa FPsc
Brara.B03408 2.0kb upstream 2.0kb upstream 5090 true A02: 28532142-28537231 Brassica rapa FPsc
Brara.B03408 2.0kb upstream 2.0kb upstream 2000 false A02: 28532142-28534141 Brassica rapa FPsc
Brara.B03408 2.0kb downstream 2.0kb downstream 5090 true A02: 28534142-28539231 Brassica rapa FPsc
Brara.B03408 2.0kb downstream 2.0kb downstream 2000 false A02: 28537232-28539231 Brassica rapa FPsc
Brara.B03408 5.0kb upstream 5.0kb upstream 8090 true A02: 28529142-28537231 Brassica rapa FPsc
Brara.B03408 5.0kb upstream 5.0kb upstream 5000 false A02: 28529142-28534141 Brassica rapa FPsc
Brara.B03408 5.0kb downstream 5.0kb downstream 8090 true A02: 28534142-28542231 Brassica rapa FPsc
Brara.B03408 5.0kb downstream 5.0kb downstream 5000 false A02: 28537232-28542231 Brassica rapa FPsc
Brara.B03408 10.0kb upstream 10.0kb upstream 13090 true A02: 28524142-28537231 Brassica rapa FPsc
Brara.B03408 10.0kb upstream 10.0kb upstream 10000 false A02: 28524142-28534141 Brassica rapa FPsc
Brara.B03408 10.0kb downstream 10.0kb downstream 13090 true A02: 28534142-28547231 Brassica rapa FPsc
Brara.B03408 10.0kb downstream 10.0kb downstream 10000 false A02: 28537232-28547231 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381477 5261 Brassicaceae View MSA
123833203 5264 Brassicales-Malvales View MSA
124336436 5266 SBM View MSA
124239348 5268 Malvidae View MSA
124068115 5270 Rosid View MSA
123752475 5271 Pentapetalae View MSA
122786354 5272 Eudicot View MSA
122046055 5273 Angiosperm View MSA
121343817 5274 Embryophyte View MSA
123428865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier