Gene : Brara.I02890 B. rapa FPsc v1.3
Defline:  (1 of 7) PTHR12758:SF20 - PEPTIDASE-C1 DOMAIN-CONTAINING PROTEIN Genomic Order:  2890
Name:  ? Brara.I02890 Secondary Identifier:  ? PAC:30641734
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I02890 0.5kb upstream 0.5kb upstream 6277 true A09: 27991499-27997775 Brassica rapa FPsc
Brara.I02890 0.5kb upstream 0.5kb upstream 500 false A09: 27991499-27991998 Brassica rapa FPsc
Brara.I02890 0.5kb downstream 0.5kb downstream 6277 true A09: 27991999-27998275 Brassica rapa FPsc
Brara.I02890 0.5kb downstream 0.5kb downstream 500 false A09: 27997776-27998275 Brassica rapa FPsc
Brara.I02890 1.0kb upstream 1.0kb upstream 6777 true A09: 27990999-27997775 Brassica rapa FPsc
Brara.I02890 1.0kb upstream 1.0kb upstream 1000 false A09: 27990999-27991998 Brassica rapa FPsc
Brara.I02890 1.0kb downstream 1.0kb downstream 6777 true A09: 27991999-27998775 Brassica rapa FPsc
Brara.I02890 1.0kb downstream 1.0kb downstream 1000 false A09: 27997776-27998775 Brassica rapa FPsc
Brara.I02890 2.0kb upstream 2.0kb upstream 7777 true A09: 27989999-27997775 Brassica rapa FPsc
Brara.I02890 2.0kb upstream 2.0kb upstream 2000 false A09: 27989999-27991998 Brassica rapa FPsc
Brara.I02890 2.0kb downstream 2.0kb downstream 7777 true A09: 27991999-27999775 Brassica rapa FPsc
Brara.I02890 2.0kb downstream 2.0kb downstream 2000 false A09: 27997776-27999775 Brassica rapa FPsc
Brara.I02890 5.0kb upstream 5.0kb upstream 10777 true A09: 27986999-27997775 Brassica rapa FPsc
Brara.I02890 5.0kb upstream 5.0kb upstream 5000 false A09: 27986999-27991998 Brassica rapa FPsc
Brara.I02890 5.0kb downstream 5.0kb downstream 10777 true A09: 27991999-28002775 Brassica rapa FPsc
Brara.I02890 5.0kb downstream 5.0kb downstream 5000 false A09: 27997776-28002775 Brassica rapa FPsc
Brara.I02890 10.0kb upstream 10.0kb upstream 15777 true A09: 27981999-27997775 Brassica rapa FPsc
Brara.I02890 10.0kb upstream 10.0kb upstream 10000 false A09: 27981999-27991998 Brassica rapa FPsc
Brara.I02890 10.0kb downstream 10.0kb downstream 15777 true A09: 27991999-28007775 Brassica rapa FPsc
Brara.I02890 10.0kb downstream 10.0kb downstream 10000 false A09: 27997776-28007775 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122353499 5261 Brassicaceae Singleton cluster - no MSA
123792067 5264 Brassicales-Malvales Singleton cluster - no MSA
124289955 5266 SBM Singleton cluster - no MSA
124143189 5268 Malvidae Singleton cluster - no MSA
124065428 5270 Rosid View MSA
123746895 5271 Pentapetalae View MSA
122790736 5272 Eudicot View MSA
122047754 5273 Angiosperm View MSA
121350111 5274 Embryophyte View MSA
123424635 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier