Gene : Brara.B03520 B. rapa FPsc v1.3
Defline:  (1 of 10) PTHR31165:SF13 - PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  3520
Name:  ? Brara.B03520 Secondary Identifier:  ? PAC:30609829
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03520 0.5kb upstream 0.5kb upstream 1457 true A02: 29320572-29322028 Brassica rapa FPsc
Brara.B03520 0.5kb upstream 0.5kb upstream 500 false A02: 29320572-29321071 Brassica rapa FPsc
Brara.B03520 0.5kb downstream 0.5kb downstream 1457 true A02: 29321072-29322528 Brassica rapa FPsc
Brara.B03520 0.5kb downstream 0.5kb downstream 500 false A02: 29322029-29322528 Brassica rapa FPsc
Brara.B03520 1.0kb upstream 1.0kb upstream 1957 true A02: 29320072-29322028 Brassica rapa FPsc
Brara.B03520 1.0kb upstream 1.0kb upstream 1000 false A02: 29320072-29321071 Brassica rapa FPsc
Brara.B03520 1.0kb downstream 1.0kb downstream 1957 true A02: 29321072-29323028 Brassica rapa FPsc
Brara.B03520 1.0kb downstream 1.0kb downstream 1000 false A02: 29322029-29323028 Brassica rapa FPsc
Brara.B03520 2.0kb upstream 2.0kb upstream 2957 true A02: 29319072-29322028 Brassica rapa FPsc
Brara.B03520 2.0kb upstream 2.0kb upstream 2000 false A02: 29319072-29321071 Brassica rapa FPsc
Brara.B03520 2.0kb downstream 2.0kb downstream 2957 true A02: 29321072-29324028 Brassica rapa FPsc
Brara.B03520 2.0kb downstream 2.0kb downstream 2000 false A02: 29322029-29324028 Brassica rapa FPsc
Brara.B03520 5.0kb upstream 5.0kb upstream 5957 true A02: 29316072-29322028 Brassica rapa FPsc
Brara.B03520 5.0kb upstream 5.0kb upstream 5000 false A02: 29316072-29321071 Brassica rapa FPsc
Brara.B03520 5.0kb downstream 5.0kb downstream 5957 true A02: 29321072-29327028 Brassica rapa FPsc
Brara.B03520 5.0kb downstream 5.0kb downstream 5000 false A02: 29322029-29327028 Brassica rapa FPsc
Brara.B03520 10.0kb upstream 10.0kb upstream 10957 true A02: 29311072-29322028 Brassica rapa FPsc
Brara.B03520 10.0kb upstream 10.0kb upstream 10000 false A02: 29311072-29321071 Brassica rapa FPsc
Brara.B03520 10.0kb downstream 10.0kb downstream 10957 true A02: 29321072-29332028 Brassica rapa FPsc
Brara.B03520 10.0kb downstream 10.0kb downstream 10000 false A02: 29322029-29332028 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377291 5261 Brassicaceae View MSA
123839186 5264 Brassicales-Malvales View MSA
124337661 5266 SBM View MSA
124244960 5268 Malvidae View MSA
124063298 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

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