Gene : Brara.E01294 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR31934:SF2 - RNA-DIRECTED DNA METHYLATION 4 Genomic Order:  1294
Name:  ? Brara.E01294 Secondary Identifier:  ? PAC:30625361

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01294 0.5kb upstream 0.5kb upstream 2857 true A05: 7943568-7946424 Brassica rapa FPsc
Brara.E01294 0.5kb upstream 0.5kb upstream 500 false A05: 7943568-7944067 Brassica rapa FPsc
Brara.E01294 0.5kb downstream 0.5kb downstream 2857 true A05: 7944068-7946924 Brassica rapa FPsc
Brara.E01294 0.5kb downstream 0.5kb downstream 500 false A05: 7946425-7946924 Brassica rapa FPsc
Brara.E01294 1.0kb upstream 1.0kb upstream 3357 true A05: 7943068-7946424 Brassica rapa FPsc
Brara.E01294 1.0kb upstream 1.0kb upstream 1000 false A05: 7943068-7944067 Brassica rapa FPsc
Brara.E01294 1.0kb downstream 1.0kb downstream 3357 true A05: 7944068-7947424 Brassica rapa FPsc
Brara.E01294 1.0kb downstream 1.0kb downstream 1000 false A05: 7946425-7947424 Brassica rapa FPsc
Brara.E01294 2.0kb upstream 2.0kb upstream 4357 true A05: 7942068-7946424 Brassica rapa FPsc
Brara.E01294 2.0kb upstream 2.0kb upstream 2000 false A05: 7942068-7944067 Brassica rapa FPsc
Brara.E01294 2.0kb downstream 2.0kb downstream 4357 true A05: 7944068-7948424 Brassica rapa FPsc
Brara.E01294 2.0kb downstream 2.0kb downstream 2000 false A05: 7946425-7948424 Brassica rapa FPsc
Brara.E01294 5.0kb upstream 5.0kb upstream 7357 true A05: 7939068-7946424 Brassica rapa FPsc
Brara.E01294 5.0kb upstream 5.0kb upstream 5000 false A05: 7939068-7944067 Brassica rapa FPsc
Brara.E01294 5.0kb downstream 5.0kb downstream 7357 true A05: 7944068-7951424 Brassica rapa FPsc
Brara.E01294 5.0kb downstream 5.0kb downstream 5000 false A05: 7946425-7951424 Brassica rapa FPsc
Brara.E01294 10.0kb upstream 10.0kb upstream 12357 true A05: 7934068-7946424 Brassica rapa FPsc
Brara.E01294 10.0kb upstream 10.0kb upstream 10000 false A05: 7934068-7944067 Brassica rapa FPsc
Brara.E01294 10.0kb downstream 10.0kb downstream 12357 true A05: 7944068-7956424 Brassica rapa FPsc
Brara.E01294 10.0kb downstream 10.0kb downstream 10000 false A05: 7946425-7956424 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370187 5261 Brassicaceae View MSA
123831966 5264 Brassicales-Malvales View MSA
124338280 5266 SBM View MSA
124244233 5268 Malvidae View MSA
124068776 5270 Rosid View MSA
123739864 5271 Pentapetalae View MSA
122793306 5272 Eudicot View MSA
122051086 5273 Angiosperm View MSA
121346551 5274 Embryophyte View MSA
123380403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier