Gene : Brara.E01301 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.3.1.39 - [Acyl-carrier-protein] S-malonyltransferase / MCAT Genomic Order:  1301
Name:  ? Brara.E01301 Secondary Identifier:  ? PAC:30625412
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4381 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7388 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01301 0.5kb upstream 0.5kb upstream 2896 true A05: 7978642-7981537 Brassica rapa FPsc
Brara.E01301 0.5kb upstream 0.5kb upstream 500 false A05: 7978642-7979141 Brassica rapa FPsc
Brara.E01301 0.5kb downstream 0.5kb downstream 2896 true A05: 7979142-7982037 Brassica rapa FPsc
Brara.E01301 0.5kb downstream 0.5kb downstream 500 false A05: 7981538-7982037 Brassica rapa FPsc
Brara.E01301 1.0kb upstream 1.0kb upstream 3396 true A05: 7978142-7981537 Brassica rapa FPsc
Brara.E01301 1.0kb upstream 1.0kb upstream 1000 false A05: 7978142-7979141 Brassica rapa FPsc
Brara.E01301 1.0kb downstream 1.0kb downstream 3396 true A05: 7979142-7982537 Brassica rapa FPsc
Brara.E01301 1.0kb downstream 1.0kb downstream 1000 false A05: 7981538-7982537 Brassica rapa FPsc
Brara.E01301 2.0kb upstream 2.0kb upstream 4396 true A05: 7977142-7981537 Brassica rapa FPsc
Brara.E01301 2.0kb upstream 2.0kb upstream 2000 false A05: 7977142-7979141 Brassica rapa FPsc
Brara.E01301 2.0kb downstream 2.0kb downstream 4396 true A05: 7979142-7983537 Brassica rapa FPsc
Brara.E01301 2.0kb downstream 2.0kb downstream 2000 false A05: 7981538-7983537 Brassica rapa FPsc
Brara.E01301 5.0kb upstream 5.0kb upstream 7396 true A05: 7974142-7981537 Brassica rapa FPsc
Brara.E01301 5.0kb upstream 5.0kb upstream 5000 false A05: 7974142-7979141 Brassica rapa FPsc
Brara.E01301 5.0kb downstream 5.0kb downstream 7396 true A05: 7979142-7986537 Brassica rapa FPsc
Brara.E01301 5.0kb downstream 5.0kb downstream 5000 false A05: 7981538-7986537 Brassica rapa FPsc
Brara.E01301 10.0kb upstream 10.0kb upstream 12396 true A05: 7969142-7981537 Brassica rapa FPsc
Brara.E01301 10.0kb upstream 10.0kb upstream 10000 false A05: 7969142-7979141 Brassica rapa FPsc
Brara.E01301 10.0kb downstream 10.0kb downstream 12396 true A05: 7979142-7991537 Brassica rapa FPsc
Brara.E01301 10.0kb downstream 10.0kb downstream 10000 false A05: 7981538-7991537 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041321 5273 Angiosperm View MSA
122365760 5261 Brassicaceae View MSA
123829753 5264 Brassicales-Malvales View MSA
124345768 5266 SBM View MSA
124241269 5268 Malvidae View MSA
124063933 5270 Rosid View MSA
123737538 5271 Pentapetalae View MSA
122786966 5272 Eudicot View MSA
121346030 5274 Embryophyte View MSA
123426767 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier