Gene : Brara.E01764 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein Genomic Order:  1764
Name:  ? Brara.E01764 Secondary Identifier:  ? PAC:30626901
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-622 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01764 0.5kb upstream 0.5kb upstream 4281 true A05: 13001156-13005436 Brassica rapa FPsc
Brara.E01764 0.5kb upstream 0.5kb upstream 500 false A05: 13001156-13001655 Brassica rapa FPsc
Brara.E01764 0.5kb downstream 0.5kb downstream 4281 true A05: 13001656-13005936 Brassica rapa FPsc
Brara.E01764 0.5kb downstream 0.5kb downstream 500 false A05: 13005437-13005936 Brassica rapa FPsc
Brara.E01764 1.0kb upstream 1.0kb upstream 4781 true A05: 13000656-13005436 Brassica rapa FPsc
Brara.E01764 1.0kb upstream 1.0kb upstream 1000 false A05: 13000656-13001655 Brassica rapa FPsc
Brara.E01764 1.0kb downstream 1.0kb downstream 4781 true A05: 13001656-13006436 Brassica rapa FPsc
Brara.E01764 1.0kb downstream 1.0kb downstream 1000 false A05: 13005437-13006436 Brassica rapa FPsc
Brara.E01764 2.0kb upstream 2.0kb upstream 5781 true A05: 12999656-13005436 Brassica rapa FPsc
Brara.E01764 2.0kb upstream 2.0kb upstream 2000 false A05: 12999656-13001655 Brassica rapa FPsc
Brara.E01764 2.0kb downstream 2.0kb downstream 5781 true A05: 13001656-13007436 Brassica rapa FPsc
Brara.E01764 2.0kb downstream 2.0kb downstream 2000 false A05: 13005437-13007436 Brassica rapa FPsc
Brara.E01764 5.0kb upstream 5.0kb upstream 8781 true A05: 12996656-13005436 Brassica rapa FPsc
Brara.E01764 5.0kb upstream 5.0kb upstream 5000 false A05: 12996656-13001655 Brassica rapa FPsc
Brara.E01764 5.0kb downstream 5.0kb downstream 8781 true A05: 13001656-13010436 Brassica rapa FPsc
Brara.E01764 5.0kb downstream 5.0kb downstream 5000 false A05: 13005437-13010436 Brassica rapa FPsc
Brara.E01764 10.0kb upstream 10.0kb upstream 13781 true A05: 12991656-13005436 Brassica rapa FPsc
Brara.E01764 10.0kb upstream 10.0kb upstream 10000 false A05: 12991656-13001655 Brassica rapa FPsc
Brara.E01764 10.0kb downstream 10.0kb downstream 13781 true A05: 13001656-13015436 Brassica rapa FPsc
Brara.E01764 10.0kb downstream 10.0kb downstream 10000 false A05: 13005437-13015436 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374165 5261 Brassicaceae View MSA
123836370 5264 Brassicales-Malvales View MSA
124336942 5266 SBM View MSA
124254033 5268 Malvidae View MSA
124071103 5270 Rosid View MSA
123740626 5271 Pentapetalae View MSA
122790728 5272 Eudicot View MSA
122042612 5273 Angiosperm View MSA
121345518 5274 Embryophyte View MSA
123424723 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier