Gene : Brara.I04343 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11614:SF88 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  4343
Name:  ? Brara.I04343 Secondary Identifier:  ? PAC:30640917
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7420 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04343 0.5kb upstream 0.5kb upstream 3624 true A09: 38077477-38081100 Brassica rapa FPsc
Brara.I04343 0.5kb upstream 0.5kb upstream 500 false A09: 38080601-38081100 Brassica rapa FPsc
Brara.I04343 0.5kb downstream 0.5kb downstream 3624 true A09: 38076977-38080600 Brassica rapa FPsc
Brara.I04343 0.5kb downstream 0.5kb downstream 500 false A09: 38076977-38077476 Brassica rapa FPsc
Brara.I04343 1.0kb upstream 1.0kb upstream 4124 true A09: 38077477-38081600 Brassica rapa FPsc
Brara.I04343 1.0kb upstream 1.0kb upstream 1000 false A09: 38080601-38081600 Brassica rapa FPsc
Brara.I04343 1.0kb downstream 1.0kb downstream 4124 true A09: 38076477-38080600 Brassica rapa FPsc
Brara.I04343 1.0kb downstream 1.0kb downstream 1000 false A09: 38076477-38077476 Brassica rapa FPsc
Brara.I04343 2.0kb upstream 2.0kb upstream 5124 true A09: 38077477-38082600 Brassica rapa FPsc
Brara.I04343 2.0kb upstream 2.0kb upstream 2000 false A09: 38080601-38082600 Brassica rapa FPsc
Brara.I04343 2.0kb downstream 2.0kb downstream 5124 true A09: 38075477-38080600 Brassica rapa FPsc
Brara.I04343 2.0kb downstream 2.0kb downstream 2000 false A09: 38075477-38077476 Brassica rapa FPsc
Brara.I04343 5.0kb upstream 5.0kb upstream 8124 true A09: 38077477-38085600 Brassica rapa FPsc
Brara.I04343 5.0kb upstream 5.0kb upstream 5000 false A09: 38080601-38085600 Brassica rapa FPsc
Brara.I04343 5.0kb downstream 5.0kb downstream 8124 true A09: 38072477-38080600 Brassica rapa FPsc
Brara.I04343 5.0kb downstream 5.0kb downstream 5000 false A09: 38072477-38077476 Brassica rapa FPsc
Brara.I04343 10.0kb upstream 10.0kb upstream 13124 true A09: 38077477-38090600 Brassica rapa FPsc
Brara.I04343 10.0kb upstream 10.0kb upstream 10000 false A09: 38080601-38090600 Brassica rapa FPsc
Brara.I04343 10.0kb downstream 10.0kb downstream 13124 true A09: 38067477-38080600 Brassica rapa FPsc
Brara.I04343 10.0kb downstream 10.0kb downstream 10000 false A09: 38067477-38077476 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123892490 5270 Rosid View MSA
122353286 5261 Brassicaceae Singleton cluster - no MSA
123842635 5264 Brassicales-Malvales View MSA
124323658 5266 SBM View MSA
124169575 5268 Malvidae View MSA
123753493 5271 Pentapetalae View MSA
122796454 5272 Eudicot View MSA
122051494 5273 Angiosperm View MSA
121350082 5274 Embryophyte View MSA
123428617 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier