Gene : Brara.I04388 B. rapa FPsc v1.3
Defline:  (1 of 1) 4.2.1.75 - Uroporphyrinogen-III synthase / Uroporphyrinogen-III cosynthetase Genomic Order:  4388
Name:  ? Brara.I04388 Secondary Identifier:  ? PAC:30645612
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5188 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5918 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04388 0.5kb upstream 0.5kb upstream 2900 true A09: 38334823-38337722 Brassica rapa FPsc
Brara.I04388 0.5kb upstream 0.5kb upstream 500 false A09: 38334823-38335322 Brassica rapa FPsc
Brara.I04388 0.5kb downstream 0.5kb downstream 2900 true A09: 38335323-38338222 Brassica rapa FPsc
Brara.I04388 0.5kb downstream 0.5kb downstream 500 false A09: 38337723-38338222 Brassica rapa FPsc
Brara.I04388 1.0kb upstream 1.0kb upstream 3400 true A09: 38334323-38337722 Brassica rapa FPsc
Brara.I04388 1.0kb upstream 1.0kb upstream 1000 false A09: 38334323-38335322 Brassica rapa FPsc
Brara.I04388 1.0kb downstream 1.0kb downstream 3400 true A09: 38335323-38338722 Brassica rapa FPsc
Brara.I04388 1.0kb downstream 1.0kb downstream 1000 false A09: 38337723-38338722 Brassica rapa FPsc
Brara.I04388 2.0kb upstream 2.0kb upstream 4400 true A09: 38333323-38337722 Brassica rapa FPsc
Brara.I04388 2.0kb upstream 2.0kb upstream 2000 false A09: 38333323-38335322 Brassica rapa FPsc
Brara.I04388 2.0kb downstream 2.0kb downstream 4400 true A09: 38335323-38339722 Brassica rapa FPsc
Brara.I04388 2.0kb downstream 2.0kb downstream 2000 false A09: 38337723-38339722 Brassica rapa FPsc
Brara.I04388 5.0kb upstream 5.0kb upstream 7400 true A09: 38330323-38337722 Brassica rapa FPsc
Brara.I04388 5.0kb upstream 5.0kb upstream 5000 false A09: 38330323-38335322 Brassica rapa FPsc
Brara.I04388 5.0kb downstream 5.0kb downstream 7400 true A09: 38335323-38342722 Brassica rapa FPsc
Brara.I04388 5.0kb downstream 5.0kb downstream 5000 false A09: 38337723-38342722 Brassica rapa FPsc
Brara.I04388 10.0kb upstream 10.0kb upstream 12400 true A09: 38325323-38337722 Brassica rapa FPsc
Brara.I04388 10.0kb upstream 10.0kb upstream 10000 false A09: 38325323-38335322 Brassica rapa FPsc
Brara.I04388 10.0kb downstream 10.0kb downstream 12400 true A09: 38335323-38347722 Brassica rapa FPsc
Brara.I04388 10.0kb downstream 10.0kb downstream 10000 false A09: 38337723-38347722 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381443 5261 Brassicaceae View MSA
123827452 5264 Brassicales-Malvales View MSA
124338211 5266 SBM View MSA
124240174 5268 Malvidae View MSA
124064884 5270 Rosid View MSA
123747400 5271 Pentapetalae View MSA
122796424 5272 Eudicot View MSA
122042127 5273 Angiosperm View MSA
121345873 5274 Embryophyte View MSA
123424653 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier