Gene : Brara.I04189 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR31707:SF35 - PECTINESTERASE/PECTINESTERASE INHIBITOR 36-RELATED Genomic Order:  4189
Name:  ? Brara.I04189 Secondary Identifier:  ? PAC:30645582
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04189 0.5kb upstream 0.5kb upstream 3928 true A09: 37338641-37342568 Brassica rapa FPsc
Brara.I04189 0.5kb upstream 0.5kb upstream 500 false A09: 37338641-37339140 Brassica rapa FPsc
Brara.I04189 0.5kb downstream 0.5kb downstream 3928 true A09: 37339141-37343068 Brassica rapa FPsc
Brara.I04189 0.5kb downstream 0.5kb downstream 500 false A09: 37342569-37343068 Brassica rapa FPsc
Brara.I04189 1.0kb upstream 1.0kb upstream 4428 true A09: 37338141-37342568 Brassica rapa FPsc
Brara.I04189 1.0kb upstream 1.0kb upstream 1000 false A09: 37338141-37339140 Brassica rapa FPsc
Brara.I04189 1.0kb downstream 1.0kb downstream 4428 true A09: 37339141-37343568 Brassica rapa FPsc
Brara.I04189 1.0kb downstream 1.0kb downstream 1000 false A09: 37342569-37343568 Brassica rapa FPsc
Brara.I04189 2.0kb upstream 2.0kb upstream 5428 true A09: 37337141-37342568 Brassica rapa FPsc
Brara.I04189 2.0kb upstream 2.0kb upstream 2000 false A09: 37337141-37339140 Brassica rapa FPsc
Brara.I04189 2.0kb downstream 2.0kb downstream 5428 true A09: 37339141-37344568 Brassica rapa FPsc
Brara.I04189 2.0kb downstream 2.0kb downstream 2000 false A09: 37342569-37344568 Brassica rapa FPsc
Brara.I04189 5.0kb upstream 5.0kb upstream 8428 true A09: 37334141-37342568 Brassica rapa FPsc
Brara.I04189 5.0kb upstream 5.0kb upstream 5000 false A09: 37334141-37339140 Brassica rapa FPsc
Brara.I04189 5.0kb downstream 5.0kb downstream 8428 true A09: 37339141-37347568 Brassica rapa FPsc
Brara.I04189 5.0kb downstream 5.0kb downstream 5000 false A09: 37342569-37347568 Brassica rapa FPsc
Brara.I04189 10.0kb upstream 10.0kb upstream 13428 true A09: 37329141-37342568 Brassica rapa FPsc
Brara.I04189 10.0kb upstream 10.0kb upstream 10000 false A09: 37329141-37339140 Brassica rapa FPsc
Brara.I04189 10.0kb downstream 10.0kb downstream 13428 true A09: 37339141-37352568 Brassica rapa FPsc
Brara.I04189 10.0kb downstream 10.0kb downstream 10000 false A09: 37342569-37352568 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367115 5261 Brassicaceae View MSA
123829161 5264 Brassicales-Malvales View MSA
124350444 5266 SBM View MSA
124244042 5268 Malvidae View MSA
124073271 5270 Rosid View MSA
123752785 5271 Pentapetalae View MSA
122796250 5272 Eudicot View MSA
122050958 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier