Gene : Brara.I04036 B. rapa FPsc v1.3
Defline:  (1 of 3) 1.1.1.86 - Ketol-acid reductoisomerase (NADP(+)) / Dihydroxyisovalerate dehydrogenase (isomerizing) Genomic Order:  4036
Name:  ? Brara.I04036 Secondary Identifier:  ? PAC:30641386
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc BRANCHED-CHAIN-AA-SYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc ILEUSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3001 Brassica rapa FPsc pathologic  
BrapaFPsc VALSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04036 0.5kb upstream 0.5kb upstream 3432 true A09: 36460985-36464416 Brassica rapa FPsc
Brara.I04036 0.5kb upstream 0.5kb upstream 500 false A09: 36460985-36461484 Brassica rapa FPsc
Brara.I04036 0.5kb downstream 0.5kb downstream 3432 true A09: 36461485-36464916 Brassica rapa FPsc
Brara.I04036 0.5kb downstream 0.5kb downstream 500 false A09: 36464417-36464916 Brassica rapa FPsc
Brara.I04036 1.0kb upstream 1.0kb upstream 3932 true A09: 36460485-36464416 Brassica rapa FPsc
Brara.I04036 1.0kb upstream 1.0kb upstream 1000 false A09: 36460485-36461484 Brassica rapa FPsc
Brara.I04036 1.0kb downstream 1.0kb downstream 3932 true A09: 36461485-36465416 Brassica rapa FPsc
Brara.I04036 1.0kb downstream 1.0kb downstream 1000 false A09: 36464417-36465416 Brassica rapa FPsc
Brara.I04036 2.0kb upstream 2.0kb upstream 4932 true A09: 36459485-36464416 Brassica rapa FPsc
Brara.I04036 2.0kb upstream 2.0kb upstream 2000 false A09: 36459485-36461484 Brassica rapa FPsc
Brara.I04036 2.0kb downstream 2.0kb downstream 4932 true A09: 36461485-36466416 Brassica rapa FPsc
Brara.I04036 2.0kb downstream 2.0kb downstream 2000 false A09: 36464417-36466416 Brassica rapa FPsc
Brara.I04036 5.0kb upstream 5.0kb upstream 7932 true A09: 36456485-36464416 Brassica rapa FPsc
Brara.I04036 5.0kb upstream 5.0kb upstream 5000 false A09: 36456485-36461484 Brassica rapa FPsc
Brara.I04036 5.0kb downstream 5.0kb downstream 7932 true A09: 36461485-36469416 Brassica rapa FPsc
Brara.I04036 5.0kb downstream 5.0kb downstream 5000 false A09: 36464417-36469416 Brassica rapa FPsc
Brara.I04036 10.0kb upstream 10.0kb upstream 12932 true A09: 36451485-36464416 Brassica rapa FPsc
Brara.I04036 10.0kb upstream 10.0kb upstream 10000 false A09: 36451485-36461484 Brassica rapa FPsc
Brara.I04036 10.0kb downstream 10.0kb downstream 12932 true A09: 36461485-36474416 Brassica rapa FPsc
Brara.I04036 10.0kb downstream 10.0kb downstream 10000 false A09: 36464417-36474416 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028420 5273 Angiosperm View MSA
122355984 5261 Brassicaceae View MSA
123794142 5264 Brassicales-Malvales View MSA
124291960 5266 SBM View MSA
124251439 5268 Malvidae View MSA
124041761 5270 Rosid View MSA
123754876 5271 Pentapetalae View MSA
122776203 5272 Eudicot View MSA
121297914 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier