Gene : Brara.E01675 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  1675
Name:  ? Brara.E01675 Secondary Identifier:  ? PAC:30624857
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2541 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01675 0.5kb upstream 0.5kb upstream 8478 true A05: 11753909-11762386 Brassica rapa FPsc
Brara.E01675 0.5kb upstream 0.5kb upstream 500 false A05: 11753909-11754408 Brassica rapa FPsc
Brara.E01675 0.5kb downstream 0.5kb downstream 8478 true A05: 11754409-11762886 Brassica rapa FPsc
Brara.E01675 0.5kb downstream 0.5kb downstream 500 false A05: 11762387-11762886 Brassica rapa FPsc
Brara.E01675 1.0kb upstream 1.0kb upstream 8978 true A05: 11753409-11762386 Brassica rapa FPsc
Brara.E01675 1.0kb upstream 1.0kb upstream 1000 false A05: 11753409-11754408 Brassica rapa FPsc
Brara.E01675 1.0kb downstream 1.0kb downstream 8978 true A05: 11754409-11763386 Brassica rapa FPsc
Brara.E01675 1.0kb downstream 1.0kb downstream 1000 false A05: 11762387-11763386 Brassica rapa FPsc
Brara.E01675 2.0kb upstream 2.0kb upstream 9978 true A05: 11752409-11762386 Brassica rapa FPsc
Brara.E01675 2.0kb upstream 2.0kb upstream 2000 false A05: 11752409-11754408 Brassica rapa FPsc
Brara.E01675 2.0kb downstream 2.0kb downstream 9978 true A05: 11754409-11764386 Brassica rapa FPsc
Brara.E01675 2.0kb downstream 2.0kb downstream 2000 false A05: 11762387-11764386 Brassica rapa FPsc
Brara.E01675 5.0kb upstream 5.0kb upstream 12978 true A05: 11749409-11762386 Brassica rapa FPsc
Brara.E01675 5.0kb upstream 5.0kb upstream 5000 false A05: 11749409-11754408 Brassica rapa FPsc
Brara.E01675 5.0kb downstream 5.0kb downstream 12978 true A05: 11754409-11767386 Brassica rapa FPsc
Brara.E01675 5.0kb downstream 5.0kb downstream 5000 false A05: 11762387-11767386 Brassica rapa FPsc
Brara.E01675 10.0kb upstream 10.0kb upstream 17978 true A05: 11744409-11762386 Brassica rapa FPsc
Brara.E01675 10.0kb upstream 10.0kb upstream 10000 false A05: 11744409-11754408 Brassica rapa FPsc
Brara.E01675 10.0kb downstream 10.0kb downstream 17978 true A05: 11754409-11772386 Brassica rapa FPsc
Brara.E01675 10.0kb downstream 10.0kb downstream 10000 false A05: 11762387-11772386 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349458 5261 Brassicaceae Singleton cluster - no MSA
123788642 5264 Brassicales-Malvales Singleton cluster - no MSA
124286663 5266 SBM Singleton cluster - no MSA
124140487 5268 Malvidae Singleton cluster - no MSA
123867695 5270 Rosid Singleton cluster - no MSA
123743955 5271 Pentapetalae View MSA
122786047 5272 Eudicot View MSA
122044156 5273 Angiosperm View MSA
121351053 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier