Gene : Brara.I03920 B. rapa FPsc v1.3
Defline:  (1 of 2) 1.14.13.81 - Magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase / Mg-protoporphyrin IX monomethyl ester oxidative cyclase Genomic Order:  3920
Name:  ? Brara.I03920 Secondary Identifier:  ? PAC:30646435
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc CHLOROPHYLL-SYN Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I03920 0.5kb upstream 0.5kb upstream 2606 true A09: 35717177-35719782 Brassica rapa FPsc
Brara.I03920 0.5kb upstream 0.5kb upstream 500 false A09: 35717177-35717676 Brassica rapa FPsc
Brara.I03920 0.5kb downstream 0.5kb downstream 2606 true A09: 35717677-35720282 Brassica rapa FPsc
Brara.I03920 0.5kb downstream 0.5kb downstream 500 false A09: 35719783-35720282 Brassica rapa FPsc
Brara.I03920 1.0kb upstream 1.0kb upstream 3106 true A09: 35716677-35719782 Brassica rapa FPsc
Brara.I03920 1.0kb upstream 1.0kb upstream 1000 false A09: 35716677-35717676 Brassica rapa FPsc
Brara.I03920 1.0kb downstream 1.0kb downstream 3106 true A09: 35717677-35720782 Brassica rapa FPsc
Brara.I03920 1.0kb downstream 1.0kb downstream 1000 false A09: 35719783-35720782 Brassica rapa FPsc
Brara.I03920 2.0kb upstream 2.0kb upstream 4106 true A09: 35715677-35719782 Brassica rapa FPsc
Brara.I03920 2.0kb upstream 2.0kb upstream 2000 false A09: 35715677-35717676 Brassica rapa FPsc
Brara.I03920 2.0kb downstream 2.0kb downstream 4106 true A09: 35717677-35721782 Brassica rapa FPsc
Brara.I03920 2.0kb downstream 2.0kb downstream 2000 false A09: 35719783-35721782 Brassica rapa FPsc
Brara.I03920 5.0kb upstream 5.0kb upstream 7106 true A09: 35712677-35719782 Brassica rapa FPsc
Brara.I03920 5.0kb upstream 5.0kb upstream 5000 false A09: 35712677-35717676 Brassica rapa FPsc
Brara.I03920 5.0kb downstream 5.0kb downstream 7106 true A09: 35717677-35724782 Brassica rapa FPsc
Brara.I03920 5.0kb downstream 5.0kb downstream 5000 false A09: 35719783-35724782 Brassica rapa FPsc
Brara.I03920 10.0kb upstream 10.0kb upstream 12106 true A09: 35707677-35719782 Brassica rapa FPsc
Brara.I03920 10.0kb upstream 10.0kb upstream 10000 false A09: 35707677-35717676 Brassica rapa FPsc
Brara.I03920 10.0kb downstream 10.0kb downstream 12106 true A09: 35717677-35729782 Brassica rapa FPsc
Brara.I03920 10.0kb downstream 10.0kb downstream 10000 false A09: 35719783-35729782 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122354650 5261 Brassicaceae Singleton cluster - no MSA
123839485 5264 Brassicales-Malvales View MSA
124337176 5266 SBM View MSA
124242983 5268 Malvidae View MSA
124064465 5270 Rosid View MSA
123737213 5271 Pentapetalae View MSA
122789972 5272 Eudicot View MSA
122044823 5273 Angiosperm View MSA
121345959 5274 Embryophyte View MSA
123424479 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier