Gene : Brara.B03886 B. rapa FPsc v1.3
Defline:  (1 of 1) PF02184//PF05843 - HAT (Half-A-TPR) repeat (HAT) // Suppressor of forked protein (Suf) (Suf) Genomic Order:  3886
Name:  ? Brara.B03886 Secondary Identifier:  ? PAC:30607345
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B03886 0.5kb upstream 0.5kb upstream 2561 true A02: 31888391-31890951 Brassica rapa FPsc
Brara.B03886 0.5kb upstream 0.5kb upstream 500 false A02: 31890452-31890951 Brassica rapa FPsc
Brara.B03886 0.5kb downstream 0.5kb downstream 2561 true A02: 31887891-31890451 Brassica rapa FPsc
Brara.B03886 0.5kb downstream 0.5kb downstream 500 false A02: 31887891-31888390 Brassica rapa FPsc
Brara.B03886 1.0kb upstream 1.0kb upstream 3061 true A02: 31888391-31891451 Brassica rapa FPsc
Brara.B03886 1.0kb upstream 1.0kb upstream 1000 false A02: 31890452-31891451 Brassica rapa FPsc
Brara.B03886 1.0kb downstream 1.0kb downstream 3061 true A02: 31887391-31890451 Brassica rapa FPsc
Brara.B03886 1.0kb downstream 1.0kb downstream 1000 false A02: 31887391-31888390 Brassica rapa FPsc
Brara.B03886 2.0kb upstream 2.0kb upstream 4061 true A02: 31888391-31892451 Brassica rapa FPsc
Brara.B03886 2.0kb upstream 2.0kb upstream 2000 false A02: 31890452-31892451 Brassica rapa FPsc
Brara.B03886 2.0kb downstream 2.0kb downstream 4061 true A02: 31886391-31890451 Brassica rapa FPsc
Brara.B03886 2.0kb downstream 2.0kb downstream 2000 false A02: 31886391-31888390 Brassica rapa FPsc
Brara.B03886 5.0kb upstream 5.0kb upstream 7061 true A02: 31888391-31895451 Brassica rapa FPsc
Brara.B03886 5.0kb upstream 5.0kb upstream 5000 false A02: 31890452-31895451 Brassica rapa FPsc
Brara.B03886 5.0kb downstream 5.0kb downstream 7061 true A02: 31883391-31890451 Brassica rapa FPsc
Brara.B03886 5.0kb downstream 5.0kb downstream 5000 false A02: 31883391-31888390 Brassica rapa FPsc
Brara.B03886 10.0kb upstream 10.0kb upstream 12061 true A02: 31888391-31900451 Brassica rapa FPsc
Brara.B03886 10.0kb upstream 10.0kb upstream 10000 false A02: 31890452-31900451 Brassica rapa FPsc
Brara.B03886 10.0kb downstream 10.0kb downstream 12061 true A02: 31878391-31890451 Brassica rapa FPsc
Brara.B03886 10.0kb downstream 10.0kb downstream 10000 false A02: 31878391-31888390 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344626 5261 Brassicaceae Singleton cluster - no MSA
123784608 5264 Brassicales-Malvales Singleton cluster - no MSA
124282776 5266 SBM Singleton cluster - no MSA
124137303 5268 Malvidae Singleton cluster - no MSA
124066520 5270 Rosid View MSA
123747782 5271 Pentapetalae View MSA
122796524 5272 Eudicot View MSA
122043261 5273 Angiosperm View MSA
121344122 5274 Embryophyte View MSA
123426639 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier