Gene : Brara.I05247 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR13812//PTHR13812:SF20 - ORNITHINE CYCLODEAMINASE-RELATED Genomic Order:  5247
Name:  ? Brara.I05247 Secondary Identifier:  ? PAC:30645468
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5188 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5918 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I05247 0.5kb upstream 0.5kb upstream 2936 true A09: 42989296-42992231 Brassica rapa FPsc
Brara.I05247 0.5kb upstream 0.5kb upstream 500 false A09: 42989296-42989795 Brassica rapa FPsc
Brara.I05247 0.5kb downstream 0.5kb downstream 2936 true A09: 42989796-42992731 Brassica rapa FPsc
Brara.I05247 0.5kb downstream 0.5kb downstream 500 false A09: 42992232-42992731 Brassica rapa FPsc
Brara.I05247 1.0kb upstream 1.0kb upstream 3436 true A09: 42988796-42992231 Brassica rapa FPsc
Brara.I05247 1.0kb upstream 1.0kb upstream 1000 false A09: 42988796-42989795 Brassica rapa FPsc
Brara.I05247 1.0kb downstream 1.0kb downstream 3436 true A09: 42989796-42993231 Brassica rapa FPsc
Brara.I05247 1.0kb downstream 1.0kb downstream 1000 false A09: 42992232-42993231 Brassica rapa FPsc
Brara.I05247 2.0kb upstream 2.0kb upstream 4436 true A09: 42987796-42992231 Brassica rapa FPsc
Brara.I05247 2.0kb upstream 2.0kb upstream 2000 false A09: 42987796-42989795 Brassica rapa FPsc
Brara.I05247 2.0kb downstream 2.0kb downstream 4436 true A09: 42989796-42994231 Brassica rapa FPsc
Brara.I05247 2.0kb downstream 2.0kb downstream 2000 false A09: 42992232-42994231 Brassica rapa FPsc
Brara.I05247 5.0kb upstream 5.0kb upstream 7436 true A09: 42984796-42992231 Brassica rapa FPsc
Brara.I05247 5.0kb upstream 5.0kb upstream 5000 false A09: 42984796-42989795 Brassica rapa FPsc
Brara.I05247 5.0kb downstream 5.0kb downstream 7436 true A09: 42989796-42997231 Brassica rapa FPsc
Brara.I05247 5.0kb downstream 5.0kb downstream 5000 false A09: 42992232-42997231 Brassica rapa FPsc
Brara.I05247 10.0kb upstream 10.0kb upstream 12436 true A09: 42979796-42992231 Brassica rapa FPsc
Brara.I05247 10.0kb upstream 10.0kb upstream 10000 false A09: 42979796-42989795 Brassica rapa FPsc
Brara.I05247 10.0kb downstream 10.0kb downstream 12436 true A09: 42989796-43002231 Brassica rapa FPsc
Brara.I05247 10.0kb downstream 10.0kb downstream 10000 false A09: 42992232-43002231 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511214 5273 Angiosperm View MSA
122373797 5261 Brassicaceae View MSA
123800622 5264 Brassicales-Malvales View MSA
124298016 5266 SBM View MSA
124149764 5268 Malvidae View MSA
123875505 5270 Rosid View MSA
123459315 5271 Pentapetalae View MSA
122494708 5272 Eudicot View MSA
120784272 5274 Embryophyte View MSA
122826200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier