Gene : Brara.C00549 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11071:SF11 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE C Genomic Order:  549
Name:  ? Brara.C00549 Secondary Identifier:  ? PAC:30618274
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00549 0.5kb upstream 0.5kb upstream 2356 true A03: 2538976-2541331 Brassica rapa FPsc
Brara.C00549 0.5kb upstream 0.5kb upstream 500 false A03: 2540832-2541331 Brassica rapa FPsc
Brara.C00549 0.5kb downstream 0.5kb downstream 2356 true A03: 2538476-2540831 Brassica rapa FPsc
Brara.C00549 0.5kb downstream 0.5kb downstream 500 false A03: 2538476-2538975 Brassica rapa FPsc
Brara.C00549 1.0kb upstream 1.0kb upstream 2856 true A03: 2538976-2541831 Brassica rapa FPsc
Brara.C00549 1.0kb upstream 1.0kb upstream 1000 false A03: 2540832-2541831 Brassica rapa FPsc
Brara.C00549 1.0kb downstream 1.0kb downstream 2856 true A03: 2537976-2540831 Brassica rapa FPsc
Brara.C00549 1.0kb downstream 1.0kb downstream 1000 false A03: 2537976-2538975 Brassica rapa FPsc
Brara.C00549 2.0kb upstream 2.0kb upstream 3856 true A03: 2538976-2542831 Brassica rapa FPsc
Brara.C00549 2.0kb upstream 2.0kb upstream 2000 false A03: 2540832-2542831 Brassica rapa FPsc
Brara.C00549 2.0kb downstream 2.0kb downstream 3856 true A03: 2536976-2540831 Brassica rapa FPsc
Brara.C00549 2.0kb downstream 2.0kb downstream 2000 false A03: 2536976-2538975 Brassica rapa FPsc
Brara.C00549 5.0kb upstream 5.0kb upstream 6856 true A03: 2538976-2545831 Brassica rapa FPsc
Brara.C00549 5.0kb upstream 5.0kb upstream 5000 false A03: 2540832-2545831 Brassica rapa FPsc
Brara.C00549 5.0kb downstream 5.0kb downstream 6856 true A03: 2533976-2540831 Brassica rapa FPsc
Brara.C00549 5.0kb downstream 5.0kb downstream 5000 false A03: 2533976-2538975 Brassica rapa FPsc
Brara.C00549 10.0kb upstream 10.0kb upstream 11856 true A03: 2538976-2550831 Brassica rapa FPsc
Brara.C00549 10.0kb upstream 10.0kb upstream 10000 false A03: 2540832-2550831 Brassica rapa FPsc
Brara.C00549 10.0kb downstream 10.0kb downstream 11856 true A03: 2528976-2540831 Brassica rapa FPsc
Brara.C00549 10.0kb downstream 10.0kb downstream 10000 false A03: 2528976-2538975 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381251 5261 Brassicaceae View MSA
123829393 5264 Brassicales-Malvales View MSA
124346317 5266 SBM View MSA
124243935 5268 Malvidae View MSA
124069155 5270 Rosid View MSA
123741646 5271 Pentapetalae View MSA
122794502 5272 Eudicot View MSA
122048638 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121349242 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier