Gene : Brara.C00347 B. rapa FPsc v1.3
Defline:  (1 of 5) 3.2.1.22 - Alpha-galactosidase / Melibiase Genomic Order:  347
Name:  ? Brara.C00347 Secondary Identifier:  ? PAC:30618670
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-1301 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6527 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00347 0.5kb upstream 0.5kb upstream 3122 true A03: 1660926-1664047 Brassica rapa FPsc
Brara.C00347 0.5kb upstream 0.5kb upstream 500 false A03: 1663548-1664047 Brassica rapa FPsc
Brara.C00347 0.5kb downstream 0.5kb downstream 3122 true A03: 1660426-1663547 Brassica rapa FPsc
Brara.C00347 0.5kb downstream 0.5kb downstream 500 false A03: 1660426-1660925 Brassica rapa FPsc
Brara.C00347 1.0kb upstream 1.0kb upstream 3622 true A03: 1660926-1664547 Brassica rapa FPsc
Brara.C00347 1.0kb upstream 1.0kb upstream 1000 false A03: 1663548-1664547 Brassica rapa FPsc
Brara.C00347 1.0kb downstream 1.0kb downstream 3622 true A03: 1659926-1663547 Brassica rapa FPsc
Brara.C00347 1.0kb downstream 1.0kb downstream 1000 false A03: 1659926-1660925 Brassica rapa FPsc
Brara.C00347 2.0kb upstream 2.0kb upstream 4622 true A03: 1660926-1665547 Brassica rapa FPsc
Brara.C00347 2.0kb upstream 2.0kb upstream 2000 false A03: 1663548-1665547 Brassica rapa FPsc
Brara.C00347 2.0kb downstream 2.0kb downstream 4622 true A03: 1658926-1663547 Brassica rapa FPsc
Brara.C00347 2.0kb downstream 2.0kb downstream 2000 false A03: 1658926-1660925 Brassica rapa FPsc
Brara.C00347 5.0kb upstream 5.0kb upstream 7622 true A03: 1660926-1668547 Brassica rapa FPsc
Brara.C00347 5.0kb upstream 5.0kb upstream 5000 false A03: 1663548-1668547 Brassica rapa FPsc
Brara.C00347 5.0kb downstream 5.0kb downstream 7622 true A03: 1655926-1663547 Brassica rapa FPsc
Brara.C00347 5.0kb downstream 5.0kb downstream 5000 false A03: 1655926-1660925 Brassica rapa FPsc
Brara.C00347 10.0kb upstream 10.0kb upstream 12622 true A03: 1660926-1673547 Brassica rapa FPsc
Brara.C00347 10.0kb upstream 10.0kb upstream 10000 false A03: 1663548-1673547 Brassica rapa FPsc
Brara.C00347 10.0kb downstream 10.0kb downstream 12622 true A03: 1650926-1663547 Brassica rapa FPsc
Brara.C00347 10.0kb downstream 10.0kb downstream 10000 false A03: 1650926-1660925 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347843 5261 Brassicaceae Singleton cluster - no MSA
123840043 5264 Brassicales-Malvales View MSA
124322672 5266 SBM View MSA
124247152 5268 Malvidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier