Gene : Brara.C00375 B. rapa FPsc v1.3
Defline:  (1 of 1) 1.2.1.25//1.2.4.4 - 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) / Dehydrogenase, branched chain alpha-keto acid Genomic Order:  375
Name:  ? Brara.C00375 Secondary Identifier:  ? PAC:30616957
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5046 Brassica rapa FPsc pathologic  
BrapaFPsc VALDEG-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00375 0.5kb upstream 0.5kb upstream 2880 true A03: 1792420-1795299 Brassica rapa FPsc
Brara.C00375 0.5kb upstream 0.5kb upstream 500 false A03: 1794800-1795299 Brassica rapa FPsc
Brara.C00375 0.5kb downstream 0.5kb downstream 2880 true A03: 1791920-1794799 Brassica rapa FPsc
Brara.C00375 0.5kb downstream 0.5kb downstream 500 false A03: 1791920-1792419 Brassica rapa FPsc
Brara.C00375 1.0kb upstream 1.0kb upstream 3380 true A03: 1792420-1795799 Brassica rapa FPsc
Brara.C00375 1.0kb upstream 1.0kb upstream 1000 false A03: 1794800-1795799 Brassica rapa FPsc
Brara.C00375 1.0kb downstream 1.0kb downstream 3380 true A03: 1791420-1794799 Brassica rapa FPsc
Brara.C00375 1.0kb downstream 1.0kb downstream 1000 false A03: 1791420-1792419 Brassica rapa FPsc
Brara.C00375 2.0kb upstream 2.0kb upstream 4380 true A03: 1792420-1796799 Brassica rapa FPsc
Brara.C00375 2.0kb upstream 2.0kb upstream 2000 false A03: 1794800-1796799 Brassica rapa FPsc
Brara.C00375 2.0kb downstream 2.0kb downstream 4380 true A03: 1790420-1794799 Brassica rapa FPsc
Brara.C00375 2.0kb downstream 2.0kb downstream 2000 false A03: 1790420-1792419 Brassica rapa FPsc
Brara.C00375 5.0kb upstream 5.0kb upstream 7380 true A03: 1792420-1799799 Brassica rapa FPsc
Brara.C00375 5.0kb upstream 5.0kb upstream 5000 false A03: 1794800-1799799 Brassica rapa FPsc
Brara.C00375 5.0kb downstream 5.0kb downstream 7380 true A03: 1787420-1794799 Brassica rapa FPsc
Brara.C00375 5.0kb downstream 5.0kb downstream 5000 false A03: 1787420-1792419 Brassica rapa FPsc
Brara.C00375 10.0kb upstream 10.0kb upstream 12380 true A03: 1792420-1804799 Brassica rapa FPsc
Brara.C00375 10.0kb upstream 10.0kb upstream 10000 false A03: 1794800-1804799 Brassica rapa FPsc
Brara.C00375 10.0kb downstream 10.0kb downstream 12380 true A03: 1782420-1794799 Brassica rapa FPsc
Brara.C00375 10.0kb downstream 10.0kb downstream 10000 false A03: 1782420-1792419 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374463 5261 Brassicaceae View MSA
123829479 5264 Brassicales-Malvales View MSA
124346175 5266 SBM View MSA
124244585 5268 Malvidae View MSA
124064753 5270 Rosid View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier