Gene : Brara.E01827 B. rapa FPsc v1.3
Defline:  (1 of 21) PF13963 - Transposase-associated domain (Transpos_assoc) Genomic Order:  1827
Name:  ? Brara.E01827 Secondary Identifier:  ? PAC:30624538
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01827 0.5kb upstream 0.5kb upstream 3846 true A05: 14179713-14183558 Brassica rapa FPsc
Brara.E01827 0.5kb upstream 0.5kb upstream 500 false A05: 14183059-14183558 Brassica rapa FPsc
Brara.E01827 0.5kb downstream 0.5kb downstream 3846 true A05: 14179213-14183058 Brassica rapa FPsc
Brara.E01827 0.5kb downstream 0.5kb downstream 500 false A05: 14179213-14179712 Brassica rapa FPsc
Brara.E01827 1.0kb upstream 1.0kb upstream 4346 true A05: 14179713-14184058 Brassica rapa FPsc
Brara.E01827 1.0kb upstream 1.0kb upstream 1000 false A05: 14183059-14184058 Brassica rapa FPsc
Brara.E01827 1.0kb downstream 1.0kb downstream 4346 true A05: 14178713-14183058 Brassica rapa FPsc
Brara.E01827 1.0kb downstream 1.0kb downstream 1000 false A05: 14178713-14179712 Brassica rapa FPsc
Brara.E01827 2.0kb upstream 2.0kb upstream 5346 true A05: 14179713-14185058 Brassica rapa FPsc
Brara.E01827 2.0kb upstream 2.0kb upstream 2000 false A05: 14183059-14185058 Brassica rapa FPsc
Brara.E01827 2.0kb downstream 2.0kb downstream 5346 true A05: 14177713-14183058 Brassica rapa FPsc
Brara.E01827 2.0kb downstream 2.0kb downstream 2000 false A05: 14177713-14179712 Brassica rapa FPsc
Brara.E01827 5.0kb upstream 5.0kb upstream 8346 true A05: 14179713-14188058 Brassica rapa FPsc
Brara.E01827 5.0kb upstream 5.0kb upstream 5000 false A05: 14183059-14188058 Brassica rapa FPsc
Brara.E01827 5.0kb downstream 5.0kb downstream 8346 true A05: 14174713-14183058 Brassica rapa FPsc
Brara.E01827 5.0kb downstream 5.0kb downstream 5000 false A05: 14174713-14179712 Brassica rapa FPsc
Brara.E01827 10.0kb upstream 10.0kb upstream 13346 true A05: 14179713-14193058 Brassica rapa FPsc
Brara.E01827 10.0kb upstream 10.0kb upstream 10000 false A05: 14183059-14193058 Brassica rapa FPsc
Brara.E01827 10.0kb downstream 10.0kb downstream 13346 true A05: 14169713-14183058 Brassica rapa FPsc
Brara.E01827 10.0kb downstream 10.0kb downstream 10000 false A05: 14169713-14179712 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349377 5261 Brassicaceae Singleton cluster - no MSA
123788573 5264 Brassicales-Malvales Singleton cluster - no MSA
124286597 5266 SBM Singleton cluster - no MSA
124140434 5268 Malvidae Singleton cluster - no MSA
124039032 5270 Rosid View MSA
123752947 5271 Pentapetalae View MSA
122774877 5272 Eudicot View MSA
122050110 5273 Angiosperm View MSA
121351710 5274 Embryophyte View MSA
123427809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier