Gene : Brara.I04503 B. rapa FPsc v1.3

Defline:  (1 of 6) PTHR10102:SF1 - DNA-DIRECTED RNA POLYMERASE 3, CHLOROPLASTIC Genomic Order:  4503
Name:  ? Brara.I04503 Secondary Identifier:  ? PAC:30645046

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.I04503 0.5kb upstream 0.5kb upstream 5439 true A09: 39009476-39014914 Brassica rapa FPsc
Brara.I04503 0.5kb upstream 0.5kb upstream 500 false A09: 39009476-39009975 Brassica rapa FPsc
Brara.I04503 0.5kb downstream 0.5kb downstream 5439 true A09: 39009976-39015414 Brassica rapa FPsc
Brara.I04503 0.5kb downstream 0.5kb downstream 500 false A09: 39014915-39015414 Brassica rapa FPsc
Brara.I04503 1.0kb upstream 1.0kb upstream 5939 true A09: 39008976-39014914 Brassica rapa FPsc
Brara.I04503 1.0kb upstream 1.0kb upstream 1000 false A09: 39008976-39009975 Brassica rapa FPsc
Brara.I04503 1.0kb downstream 1.0kb downstream 5939 true A09: 39009976-39015914 Brassica rapa FPsc
Brara.I04503 1.0kb downstream 1.0kb downstream 1000 false A09: 39014915-39015914 Brassica rapa FPsc
Brara.I04503 2.0kb upstream 2.0kb upstream 6939 true A09: 39007976-39014914 Brassica rapa FPsc
Brara.I04503 2.0kb upstream 2.0kb upstream 2000 false A09: 39007976-39009975 Brassica rapa FPsc
Brara.I04503 2.0kb downstream 2.0kb downstream 6939 true A09: 39009976-39016914 Brassica rapa FPsc
Brara.I04503 2.0kb downstream 2.0kb downstream 2000 false A09: 39014915-39016914 Brassica rapa FPsc
Brara.I04503 5.0kb upstream 5.0kb upstream 9939 true A09: 39004976-39014914 Brassica rapa FPsc
Brara.I04503 5.0kb upstream 5.0kb upstream 5000 false A09: 39004976-39009975 Brassica rapa FPsc
Brara.I04503 5.0kb downstream 5.0kb downstream 9939 true A09: 39009976-39019914 Brassica rapa FPsc
Brara.I04503 5.0kb downstream 5.0kb downstream 5000 false A09: 39014915-39019914 Brassica rapa FPsc
Brara.I04503 10.0kb upstream 10.0kb upstream 14939 true A09: 38999976-39014914 Brassica rapa FPsc
Brara.I04503 10.0kb upstream 10.0kb upstream 10000 false A09: 38999976-39009975 Brassica rapa FPsc
Brara.I04503 10.0kb downstream 10.0kb downstream 14939 true A09: 39009976-39024914 Brassica rapa FPsc
Brara.I04503 10.0kb downstream 10.0kb downstream 10000 false A09: 39014915-39024914 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375733 5261 Brassicaceae View MSA
123831262 5264 Brassicales-Malvales View MSA
124342623 5266 SBM View MSA
124239092 5268 Malvidae View MSA
124071621 5270 Rosid View MSA
123742172 5271 Pentapetalae View MSA
122791683 5272 Eudicot View MSA
122050149 5273 Angiosperm View MSA
121347767 5274 Embryophyte View MSA
123426573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier