Gene : Brara.E01846 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR10209:SF146 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED Genomic Order:  1846
Name:  ? Brara.E01846 Secondary Identifier:  ? PAC:30626231
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ETHYL-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E01846 0.5kb upstream 0.5kb upstream 2868 true A05: 15110368-15113235 Brassica rapa FPsc
Brara.E01846 0.5kb upstream 0.5kb upstream 500 false A05: 15110368-15110867 Brassica rapa FPsc
Brara.E01846 0.5kb downstream 0.5kb downstream 2868 true A05: 15110868-15113735 Brassica rapa FPsc
Brara.E01846 0.5kb downstream 0.5kb downstream 500 false A05: 15113236-15113735 Brassica rapa FPsc
Brara.E01846 1.0kb upstream 1.0kb upstream 3368 true A05: 15109868-15113235 Brassica rapa FPsc
Brara.E01846 1.0kb upstream 1.0kb upstream 1000 false A05: 15109868-15110867 Brassica rapa FPsc
Brara.E01846 1.0kb downstream 1.0kb downstream 3368 true A05: 15110868-15114235 Brassica rapa FPsc
Brara.E01846 1.0kb downstream 1.0kb downstream 1000 false A05: 15113236-15114235 Brassica rapa FPsc
Brara.E01846 2.0kb upstream 2.0kb upstream 4368 true A05: 15108868-15113235 Brassica rapa FPsc
Brara.E01846 2.0kb upstream 2.0kb upstream 2000 false A05: 15108868-15110867 Brassica rapa FPsc
Brara.E01846 2.0kb downstream 2.0kb downstream 4368 true A05: 15110868-15115235 Brassica rapa FPsc
Brara.E01846 2.0kb downstream 2.0kb downstream 2000 false A05: 15113236-15115235 Brassica rapa FPsc
Brara.E01846 5.0kb upstream 5.0kb upstream 7368 true A05: 15105868-15113235 Brassica rapa FPsc
Brara.E01846 5.0kb upstream 5.0kb upstream 5000 false A05: 15105868-15110867 Brassica rapa FPsc
Brara.E01846 5.0kb downstream 5.0kb downstream 7368 true A05: 15110868-15118235 Brassica rapa FPsc
Brara.E01846 5.0kb downstream 5.0kb downstream 5000 false A05: 15113236-15118235 Brassica rapa FPsc
Brara.E01846 10.0kb upstream 10.0kb upstream 12368 true A05: 15100868-15113235 Brassica rapa FPsc
Brara.E01846 10.0kb upstream 10.0kb upstream 10000 false A05: 15100868-15110867 Brassica rapa FPsc
Brara.E01846 10.0kb downstream 10.0kb downstream 12368 true A05: 15110868-15123235 Brassica rapa FPsc
Brara.E01846 10.0kb downstream 10.0kb downstream 10000 false A05: 15113236-15123235 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360761 5261 Brassicaceae View MSA
123828557 5264 Brassicales-Malvales View MSA
124346706 5266 SBM View MSA
124244129 5268 Malvidae View MSA
124061088 5270 Rosid View MSA
123745959 5271 Pentapetalae View MSA
122787426 5272 Eudicot View MSA
122044176 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121345815 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier