Gene : Brara.J00179 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR13268:SF2 - AUTOPHAGY-RELATED PROTEIN 18G Genomic Order:  179
Name:  ? Brara.J00179 Secondary Identifier:  ? PAC:30612265
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00179 0.5kb upstream 0.5kb upstream 5484 true A10: 951187-956670 Brassica rapa FPsc
Brara.J00179 0.5kb upstream 0.5kb upstream 500 false A10: 951187-951686 Brassica rapa FPsc
Brara.J00179 0.5kb downstream 0.5kb downstream 5484 true A10: 951687-957170 Brassica rapa FPsc
Brara.J00179 0.5kb downstream 0.5kb downstream 500 false A10: 956671-957170 Brassica rapa FPsc
Brara.J00179 1.0kb upstream 1.0kb upstream 5984 true A10: 950687-956670 Brassica rapa FPsc
Brara.J00179 1.0kb upstream 1.0kb upstream 1000 false A10: 950687-951686 Brassica rapa FPsc
Brara.J00179 1.0kb downstream 1.0kb downstream 5984 true A10: 951687-957670 Brassica rapa FPsc
Brara.J00179 1.0kb downstream 1.0kb downstream 1000 false A10: 956671-957670 Brassica rapa FPsc
Brara.J00179 2.0kb upstream 2.0kb upstream 6984 true A10: 949687-956670 Brassica rapa FPsc
Brara.J00179 2.0kb upstream 2.0kb upstream 2000 false A10: 949687-951686 Brassica rapa FPsc
Brara.J00179 2.0kb downstream 2.0kb downstream 6984 true A10: 951687-958670 Brassica rapa FPsc
Brara.J00179 2.0kb downstream 2.0kb downstream 2000 false A10: 956671-958670 Brassica rapa FPsc
Brara.J00179 5.0kb upstream 5.0kb upstream 9984 true A10: 946687-956670 Brassica rapa FPsc
Brara.J00179 5.0kb upstream 5.0kb upstream 5000 false A10: 946687-951686 Brassica rapa FPsc
Brara.J00179 5.0kb downstream 5.0kb downstream 9984 true A10: 951687-961670 Brassica rapa FPsc
Brara.J00179 5.0kb downstream 5.0kb downstream 5000 false A10: 956671-961670 Brassica rapa FPsc
Brara.J00179 10.0kb upstream 10.0kb upstream 14984 true A10: 941687-956670 Brassica rapa FPsc
Brara.J00179 10.0kb upstream 10.0kb upstream 10000 false A10: 941687-951686 Brassica rapa FPsc
Brara.J00179 10.0kb downstream 10.0kb downstream 14984 true A10: 951687-966670 Brassica rapa FPsc
Brara.J00179 10.0kb downstream 10.0kb downstream 10000 false A10: 956671-966670 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370747 5261 Brassicaceae View MSA
123832418 5264 Brassicales-Malvales View MSA
124341740 5266 SBM View MSA
124244639 5268 Malvidae View MSA
124066220 5270 Rosid View MSA
123744735 5271 Pentapetalae View MSA
122790134 5272 Eudicot View MSA
122047922 5273 Angiosperm View MSA
121350059 5274 Embryophyte View MSA
123424091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier