Gene : Brara.J00235 B. rapa FPsc v1.3
Defline:  (1 of 2) PF13434 - L-lysine 6-monooxygenase (NADPH-requiring) (K_oxygenase) Genomic Order:  235
Name:  ? Brara.J00235 Secondary Identifier:  ? PAC:30611495
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWYDQC-4 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J00235 0.5kb upstream 0.5kb upstream 2186 true A10: 1309728-1311913 Brassica rapa FPsc
Brara.J00235 0.5kb upstream 0.5kb upstream 500 false A10: 1309728-1310227 Brassica rapa FPsc
Brara.J00235 0.5kb downstream 0.5kb downstream 2186 true A10: 1310228-1312413 Brassica rapa FPsc
Brara.J00235 0.5kb downstream 0.5kb downstream 500 false A10: 1311914-1312413 Brassica rapa FPsc
Brara.J00235 1.0kb upstream 1.0kb upstream 2686 true A10: 1309228-1311913 Brassica rapa FPsc
Brara.J00235 1.0kb upstream 1.0kb upstream 1000 false A10: 1309228-1310227 Brassica rapa FPsc
Brara.J00235 1.0kb downstream 1.0kb downstream 2686 true A10: 1310228-1312913 Brassica rapa FPsc
Brara.J00235 1.0kb downstream 1.0kb downstream 1000 false A10: 1311914-1312913 Brassica rapa FPsc
Brara.J00235 2.0kb upstream 2.0kb upstream 3686 true A10: 1308228-1311913 Brassica rapa FPsc
Brara.J00235 2.0kb upstream 2.0kb upstream 2000 false A10: 1308228-1310227 Brassica rapa FPsc
Brara.J00235 2.0kb downstream 2.0kb downstream 3686 true A10: 1310228-1313913 Brassica rapa FPsc
Brara.J00235 2.0kb downstream 2.0kb downstream 2000 false A10: 1311914-1313913 Brassica rapa FPsc
Brara.J00235 5.0kb upstream 5.0kb upstream 6686 true A10: 1305228-1311913 Brassica rapa FPsc
Brara.J00235 5.0kb upstream 5.0kb upstream 5000 false A10: 1305228-1310227 Brassica rapa FPsc
Brara.J00235 5.0kb downstream 5.0kb downstream 6686 true A10: 1310228-1316913 Brassica rapa FPsc
Brara.J00235 5.0kb downstream 5.0kb downstream 5000 false A10: 1311914-1316913 Brassica rapa FPsc
Brara.J00235 10.0kb upstream 10.0kb upstream 11686 true A10: 1300228-1311913 Brassica rapa FPsc
Brara.J00235 10.0kb upstream 10.0kb upstream 10000 false A10: 1300228-1310227 Brassica rapa FPsc
Brara.J00235 10.0kb downstream 10.0kb downstream 11686 true A10: 1310228-1321913 Brassica rapa FPsc
Brara.J00235 10.0kb downstream 10.0kb downstream 10000 false A10: 1311914-1321913 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361741 5261 Brassicaceae View MSA
123798237 5264 Brassicales-Malvales View MSA
124295905 5266 SBM View MSA
124148212 5268 Malvidae View MSA
123874256 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier