Gene : Brara.E02213 B. rapa FPsc v1.3

Defline:  (1 of 2) PTHR31060:SF13 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MPN9 Genomic Order:  2213
Name:  ? Brara.E02213 Secondary Identifier:  ? PAC:30625727

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02213 0.5kb upstream 0.5kb upstream 2776 true A05: 20256854-20259629 Brassica rapa FPsc
Brara.E02213 0.5kb upstream 0.5kb upstream 500 false A05: 20256854-20257353 Brassica rapa FPsc
Brara.E02213 0.5kb downstream 0.5kb downstream 2776 true A05: 20257354-20260129 Brassica rapa FPsc
Brara.E02213 0.5kb downstream 0.5kb downstream 500 false A05: 20259630-20260129 Brassica rapa FPsc
Brara.E02213 1.0kb upstream 1.0kb upstream 3276 true A05: 20256354-20259629 Brassica rapa FPsc
Brara.E02213 1.0kb upstream 1.0kb upstream 1000 false A05: 20256354-20257353 Brassica rapa FPsc
Brara.E02213 1.0kb downstream 1.0kb downstream 3276 true A05: 20257354-20260629 Brassica rapa FPsc
Brara.E02213 1.0kb downstream 1.0kb downstream 1000 false A05: 20259630-20260629 Brassica rapa FPsc
Brara.E02213 2.0kb upstream 2.0kb upstream 4276 true A05: 20255354-20259629 Brassica rapa FPsc
Brara.E02213 2.0kb upstream 2.0kb upstream 2000 false A05: 20255354-20257353 Brassica rapa FPsc
Brara.E02213 2.0kb downstream 2.0kb downstream 4276 true A05: 20257354-20261629 Brassica rapa FPsc
Brara.E02213 2.0kb downstream 2.0kb downstream 2000 false A05: 20259630-20261629 Brassica rapa FPsc
Brara.E02213 5.0kb upstream 5.0kb upstream 7276 true A05: 20252354-20259629 Brassica rapa FPsc
Brara.E02213 5.0kb upstream 5.0kb upstream 5000 false A05: 20252354-20257353 Brassica rapa FPsc
Brara.E02213 5.0kb downstream 5.0kb downstream 7276 true A05: 20257354-20264629 Brassica rapa FPsc
Brara.E02213 5.0kb downstream 5.0kb downstream 5000 false A05: 20259630-20264629 Brassica rapa FPsc
Brara.E02213 10.0kb upstream 10.0kb upstream 12276 true A05: 20247354-20259629 Brassica rapa FPsc
Brara.E02213 10.0kb upstream 10.0kb upstream 10000 false A05: 20247354-20257353 Brassica rapa FPsc
Brara.E02213 10.0kb downstream 10.0kb downstream 12276 true A05: 20257354-20269629 Brassica rapa FPsc
Brara.E02213 10.0kb downstream 10.0kb downstream 10000 false A05: 20259630-20269629 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377846 5261 Brassicaceae View MSA
123841091 5264 Brassicales-Malvales View MSA
124338131 5266 SBM View MSA
124243985 5268 Malvidae View MSA
124073333 5270 Rosid View MSA
123750982 5271 Pentapetalae View MSA
122787370 5272 Eudicot View MSA
122050728 5273 Angiosperm View MSA
121345298 5274 Embryophyte View MSA
123380189 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier